Alternatives and similar repositories for enhancer-gene-vis

Users that are interested in enhancer-gene-vis are comparing it to the libraries listed below

• kanaverse / scran.js
  Single cell analysis in Javascript
  ☆22Updated last month
• meuleman / epilogos
  Methods for summarizing and visualizing multi-biosample functional genomic annotations
  ☆46Updated 9 months ago
• kundajelab / gkmexplain
  Accompanying repository for GkmExplain paper
  ☆23Updated 5 years ago
• vitessce / vitessceR
  R API and htmlwidget for Vitessce
  ☆43Updated 4 months ago
• Vivianstats / scLink
  Inferring gene co-expression networks from single cell gene expression data
  ☆28Updated 3 years ago
• pachterlab / kite
  kallisto index tag extractor
  ☆20Updated 6 years ago
• mkanai / grimon
  R package for plotting 3D graphical visualization of multi-omics data.
  ☆23Updated 3 years ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆52Updated 3 weeks ago
• stjude / proteinpaint
  Data visualization and analysis framework focused on phenotype-molecular data integration at cohort level.
  ☆44Updated this week
• LieberInstitute / recount3
  Explore and download data from the recount3 project
  ☆37Updated 3 months ago
• RGLab / FAUST
  Full annotation using shape-constrained trees
  ☆28Updated 2 years ago
• cellatlas / human
  ☆44Updated last year
• nullranges / nullranges
  Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…
  ☆27Updated last month
• slowkow / cellguide
  🧭 Navigate single-cell RNA-seq datasets in your web browser.
  ☆29Updated 2 years ago
• MaayanLab / blitzgsea
  Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …
  ☆58Updated 7 months ago
• slowkow / allelefrequencies
  📂 HLA allele frequencies in tab-delimited format, downloaded from AFND.
  ☆22Updated last year
• JEFworks / ubit2
  User-friendly Bioinformatics Tools
  ☆18Updated 4 years ago
• OscarGVelasco / LotsOfCells
  R package for analysing meaningful differences in the numbers of cell populations from single-cell phenotypic data
  ☆22Updated 3 months ago
• MaayanLab / archs4
  ARCHS4 RNA-seq processing scripts and web server pages.
  ☆62Updated 5 years ago
• higlass / clodius
  Clodius is a tool for breaking up large data sets into smaller tiles that can subsequently be displayed using an appropriate viewer.
  ☆39Updated 8 months ago
• wassermanlab / JASPAR-UCSC-tracks
  Code and data used to create the JASPAR UCSC Genome Browser tracks data hub
  ☆18Updated last month
• FredPont / spatial
  Single-Cell Spatial Explorer
  ☆15Updated 2 years ago
• interactivereport / Quickomics
  Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.
  ☆42Updated last month
• pepkit / geofetch
  Builds a PEP from SRA or GEO accessions
  ☆54Updated last month
• gosling-lang / gosling-docs
  Documentations and Tutorials of Gosling.js
  ☆12Updated 4 years ago
• brianyiktaktsui / Skymap
  High-throughput gene to knowledge mapping through massive integration of public sequencing data.
  ☆31Updated 6 years ago
• AlexsLemonade / OpenScPCA-analysis
  An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal
  ☆14Updated this week
• klarman-cell-observatory / scSVA
  Single-cell Scalable Visualization and Analytics
  ☆26Updated 6 years ago
• mikelove / zinbwave-deseq2
  Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq
  ☆30Updated 5 years ago
• Oshlack / Slinker
  Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.
  ☆19Updated 3 years ago