Tools and utilities for running Dockerized metagenomics tools in the Cloud
☆21Apr 8, 2019Updated 7 years ago
Alternatives and similar repositories for Chiron
Users that are interested in Chiron are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Workshop materials for shotgun metagenomics☆38Jul 17, 2017Updated 9 years ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆18Jul 15, 2025Updated last year
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Sep 20, 2017Updated 9 years ago
- Guide to transcriptome assembly & analysis☆21Apr 12, 2017Updated 9 years ago
- Elixir Beacon Reference Implementation. Latest release is compliant with v1.1.0 of the specification.☆14Jun 19, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Analysing Metagenomic Species (MGS)☆41Nov 12, 2020Updated 5 years ago
- Strain-level abundances estimation in metagenomic samples using variation graphs☆24Jan 29, 2023Updated 3 years ago
- Automatically exported from code.google.com/p/ebi-metagenomics☆11Jun 25, 2018Updated 8 years ago
- My website developed in pelican☆14Dec 26, 2025Updated 9 months ago
- 🐦 spideog - Command line utility for Kraken2 reports.☆11Nov 30, 2020Updated 5 years ago
- Command line client and Python libraries for CosmosID API☆13Oct 28, 2025Updated 11 months ago
- A formula interface for model-first PCA; PCA for the people!☆13Aug 23, 2024Updated 2 years ago
- ☆22Sep 27, 2019Updated 7 years ago
- Snakemake-based amplicon processing protocol for 16S and ITS sequences.☆13Mar 18, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Speedy versions of phyloseq functions☆50Apr 21, 2024Updated 2 years ago
- Scatterbar - data visualization for proportional data across many spatially resolved coordinates☆13Mar 3, 2025Updated last year
- ☆16Sep 8, 2024Updated 2 years ago
- accessory functions for processing microbial community data☆12Dec 24, 2022Updated 3 years ago
- Implementation of Krona to QIIME2☆16Mar 14, 2024Updated 2 years ago
- Snakemake pipeline for downstream analysis of metagenome-assembled genomes (MAGs) (pronounced mag-pie)☆61Apr 1, 2023Updated 3 years ago
- The Microbiome Interpretable Temporal Rule Engine☆46May 26, 2021Updated 5 years ago
- Statistical Analysis of Metagenomic Profiles☆93Sep 21, 2026Updated last week
- Course Notes for PSYC 621 (Bayesian Data Analaysis, 2019 Fall)☆15Jun 5, 2020Updated 6 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆16May 29, 2025Updated last year
- Bringing core concepts from anywidget to R☆22Aug 10, 2025Updated last year
- Mutation tracker for microbial genomes☆14Sep 30, 2020Updated 6 years ago
- R package: Manifold learning in R☆14Apr 7, 2020Updated 6 years ago
- A robust, extensible metagenomics pipeline☆178Updated this week
- ☆14Apr 4, 2023Updated 3 years ago
- Repository for R and Python packages and reproduction codes in Weighted Conformalized Selection paper☆12Jul 21, 2023Updated 3 years ago
- Microbiota Analysis in R Easily☆12Jul 14, 2022Updated 4 years ago
- ☆12Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Swift Phenotypic Analysis of Cells☆11Jun 8, 2025Updated last year
- 🎺 Plot DNA digestion band patterns with Python☆20May 12, 2025Updated last year
- GenePiper☆12Mar 13, 2022Updated 4 years ago
- Microbiome classification pipeline☆67Updated this week
- Pipeline for the Nanopore 16S and ITS long read clustering and taxonomy classification☆23Jun 12, 2026Updated 3 months ago
- A template README file for including with CircuitPython badges.☆10Feb 2, 2021Updated 5 years ago
- A Hierarchical Approach to Pangenomics Inference☆13Apr 15, 2024Updated 2 years ago