Ad115 / EnsemblRestLinks
A Python interface to the Ensembl REST APIs, biological data at your fingertips.
☆12Updated last year
Alternatives and similar repositories for EnsemblRest
Users that are interested in EnsemblRest are comparing it to the libraries listed below
Sorting:
- Simple and efficient access to genomic data for deep learning models.☆42Updated 5 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis☆23Updated last week
- Code for the CRISPOR article, all data and code to create figures and analysis☆45Updated 9 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21Updated 2 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 5 years ago
- bioinformatics visualization tools with pyviz/bokeh☆20Updated 2 years ago
- A python library for creating simulated regulatory DNA sequences☆39Updated 2 years ago
- Build an index for your BAM Index (BAI)☆17Updated 10 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 months ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated 2 years ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- Library for indexing VCF files for random access searches by rsID☆17Updated 3 months ago
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- SRA python tools☆11Updated 4 years ago
- Python module to analyse CRISPR-based libraries☆13Updated 4 years ago
- Align sequences and then parse features.☆17Updated last week
- Find common blocks and differences between DNA sequences☆42Updated 6 months ago
- Python interface to amino acid properties and IEDB☆57Updated last year
- provides common tools and lookup tables used primarily by the hgvs and uta packages☆23Updated last month
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Updated last year
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆28Updated 2 months ago
- A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.☆35Updated 2 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 9 months ago
- Universal RObust Peak Annotator☆16Updated last year
- Efficient handling of FASTQ files from Python☆51Updated 2 months ago
- Python package to plot sequence logos☆29Updated 2 years ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆33Updated 6 months ago