Ad115 / EnsemblRest

Related projects: ⓘ

• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆43Updated 4 years ago
• jbloomlab / dmslogo
  draw sequence logos tailored to deep mutational scanning (DMS) data
  ☆12Updated 11 months ago
• jbkinney / mavenn
  MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect
  ☆24Updated 3 months ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 2 years ago
• zwang-bioinformatics / GOGO
  An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms
  ☆17Updated 4 years ago
• bionitio-team / bionitio-python
  Demonstrating best practices for bioinformatics command line tools
  ☆25Updated 4 years ago
• jambler24 / GenGraph
  A repository for the GenGraph toolkit for the creation and manipulation of graph genomes
  ☆51Updated 3 years ago
• widdowquinn / 2018-03-06-ibioic
  Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.
  ☆20Updated 6 years ago
• pinellolab / PrimeDesign
  Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!
  ☆22Updated 2 years ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated 11 months ago
• betteridiot / seqlogo
  Python port of the R Bioconductor `seqLogo` package
  ☆30Updated last month
• evoldoers / machineboss
  Bioinformatics Open Source Sequence machine
  ☆33Updated last year
• Edinburgh-Genome-Foundry / Geneblocks
  Find common blocks and differences between DNA sequences
  ☆38Updated 2 years ago
• BackofenLab / GraphClust-2
  A pipeline for structural clustering of RNA secondary structures
  ☆14Updated 3 years ago
• harmslab / epistasis
  A Python API for estimating statistical high-order epistasis in genotype-phenotype maps.
  ☆33Updated last year
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆41Updated 8 years ago
• plotly / react-msa-viewer
  ☆25Updated this week
• unlearnai / genemunge
  Tools for munging genomic data
  ☆21Updated 5 years ago
• dmnfarrell / pybioviz
  bioinformatics visualization tools with pyviz/bokeh
  ☆18Updated 11 months ago
• broadinstitute / adapt
  A package for designing activity-informed nucleic acid diagnostics for viruses.
  ☆29Updated last year
• SamStudio8 / majora2
  Malleable All-seeing Journal Of Research Artifacts
  ☆36Updated last year
• joachimwolff / algorithmsInBioinformatics
  Bioinformatics algorithms: Needleman-Wunsch, Feng-Doolittle, Gotoh and Nussinov implemented in Python
  ☆16Updated 7 years ago
• lcdb / lcdb-wf
  Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis
  ☆20Updated last week
• InscriptaLabs / BioCantor
  ☆21Updated 11 months ago
• gagneurlab / MMSplice_MTSplice
  Tissue-specific variant effect predictions on splicing
  ☆40Updated last year
• quinlan-lab / pathoscore
  pathoscore evaluates variant pathogenicity tools and scores.
  ☆21Updated 2 years ago
• kundajelab / simdna
  A python library for creating simulated regulatory DNA sequences
  ☆38Updated last year
• dbikard / genomenotebook
  A genome browser in your Jupyter notebook
  ☆26Updated 5 months ago
• jbloomlab / alignparse
  Align sequences and then parse features.
  ☆17Updated 3 weeks ago
• pyranges / bamread
  Bam to Pandas DataFrame, quickly
  ☆13Updated 2 weeks ago