Modified version of MultiStackRegistration, for use from scripts.
☆12May 18, 2022Updated 4 years ago
Alternatives and similar repositories for MultiStackRegistration
Users that are interested in MultiStackRegistration are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Apr 13, 2026Updated last month
- MATLAB tools for Raith electron-beam lithography (EBL) and focused ion beam (FIB) systems — Outils MATLAB pour les systèmes Raith de lith…☆21Mar 8, 2024Updated 2 years ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- ImgLib2 integration for ClearVolume☆12Feb 17, 2025Updated last year
- Legacy project superseded by https://github.com/morphonets/SNT☆13Jul 19, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Fiji package for registering and transforming arbitrarily large sequences of images☆19Sep 22, 2022Updated 3 years ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20May 1, 2026Updated 2 weeks ago
- Open-source diode laser combiner, fiber launch, and sequencing controller for fluorescence microscopy☆54Dec 21, 2020Updated 5 years ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21May 11, 2026Updated last week
- A curated list of scientific image analysis resources and software tools.☆40Apr 4, 2026Updated last month
- SCIFIO ImageIO plugin for ITK☆16Apr 23, 2026Updated 3 weeks ago
- ☆27Dec 9, 2025Updated 5 months ago
- Tutorial on reproducible research practices at SciPy 2014☆29Jul 22, 2014Updated 11 years ago
- Automatically download youtube channels and programming from public German TV stations☆16Aug 2, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Segment images utilizing pre-trained neural networks as feature extractors☆52May 11, 2026Updated last week
- ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging☆110Sep 6, 2018Updated 7 years ago
- A napari plugin for itk-elastix☆42Feb 16, 2026Updated 3 months ago
- SkewC a novel quality-assessment method to identify poor quality single-cells in scRNA-seq experiments. The method relies on the measure …☆10Aug 2, 2023Updated 2 years ago
- Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.☆83Feb 3, 2026Updated 3 months ago
- Python code for phase identification and spectrum analysis of energy dispersive x-ray spectroscopy (EDS)☆23Nov 15, 2023Updated 2 years ago
- ImageJ/TensorFlow integration library☆26Oct 1, 2025Updated 7 months ago
- ImageJ FX is new user inferface for ImageJ☆27Apr 4, 2019Updated 7 years ago
- quantixed FIJI update site☆17Apr 15, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.☆19Jun 14, 2022Updated 3 years ago
- Primer design for ATAC-qPCR☆13Jan 11, 2022Updated 4 years ago
- A landing page for web feeds☆11Sep 17, 2024Updated last year
- Block-wise operations for large nD volumes☆45May 12, 2026Updated last week
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆37Mar 3, 2026Updated 2 months ago
- A template repo used to make new napari plugins☆37May 1, 2026Updated 2 weeks ago
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆31Mar 14, 2025Updated last year
- sciview is a tool for visualization and interaction with ND image and mesh data☆75Feb 26, 2026Updated 2 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆73May 4, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Raw format to OME-TIFF converter☆57Apr 24, 2026Updated 3 weeks ago
- A napari plugin for zarr backed OME-NGFF images☆50May 11, 2026Updated last week
- Preprocessing pipeline for (sc)ATAC data☆10Feb 22, 2022Updated 4 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆21Mar 12, 2026Updated 2 months ago
- Kitware Course in Biomedical Image Analysis and Visualization: ITK☆16Jan 3, 2025Updated last year
- ☆18Nov 25, 2025Updated 5 months ago
- ☆15Oct 19, 2023Updated 2 years ago