Modified version of MultiStackRegistration, for use from scripts.
☆12May 18, 2022Updated 3 years ago
Alternatives and similar repositories for MultiStackRegistration
Users that are interested in MultiStackRegistration are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Apr 13, 2026Updated 2 weeks ago
- MATLAB tools for Raith electron-beam lithography (EBL) and focused ion beam (FIB) systems — Outils MATLAB pour les systèmes Raith de lith…☆21Mar 8, 2024Updated 2 years ago
- Deep Learning segmentation suite designed for 2D microscopy image segmentation☆10Dec 17, 2021Updated 4 years ago
- ImgLib2 integration for ClearVolume☆12Feb 17, 2025Updated last year
- Legacy project superseded by https://github.com/morphonets/SNT☆13Jul 19, 2021Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Fiji package for registering and transforming arbitrarily large sequences of images☆19Sep 22, 2022Updated 3 years ago
- A collection of Image Processing and Analysis (IPA) functions used at the Facility for Advanced Imaging and Microscopy (FAIM)☆20Apr 20, 2026Updated last week
- Open-source diode laser combiner, fiber launch, and sequencing controller for fluorescence microscopy☆54Dec 21, 2020Updated 5 years ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21Apr 16, 2026Updated last week
- A curated list of scientific image analysis resources and software tools.☆37Apr 4, 2026Updated 3 weeks ago
- SCIFIO ImageIO plugin for ITK☆16Updated this week
- ☆27Dec 9, 2025Updated 4 months ago
- Tutorial on reproducible research practices at SciPy 2014☆29Jul 22, 2014Updated 11 years ago
- Automatically download youtube channels and programming from public German TV stations☆16Aug 2, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Segment images utilizing pre-trained neural networks as feature extractors☆52Apr 8, 2026Updated 3 weeks ago
- ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging☆108Sep 6, 2018Updated 7 years ago
- A napari plugin for itk-elastix☆42Feb 16, 2026Updated 2 months ago
- SkewC a novel quality-assessment method to identify poor quality single-cells in scRNA-seq experiments. The method relies on the measure …☆10Aug 2, 2023Updated 2 years ago
- Mastodon – a large-scale tracking and track-editing framework for large, multi-view images.☆83Feb 3, 2026Updated 2 months ago
- Python code for phase identification and spectrum analysis of energy dispersive x-ray spectroscopy (EDS)☆23Nov 15, 2023Updated 2 years ago
- ImageJ/TensorFlow integration library☆26Oct 1, 2025Updated 6 months ago
- ImageJ FX is new user inferface for ImageJ☆27Apr 4, 2019Updated 7 years ago
- quantixed FIJI update site☆17Apr 15, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- EXPERIMENTAL repository for exploring Ops approaches, algorithms, etc.☆19Jun 14, 2022Updated 3 years ago
- A landing page for web feeds☆11Sep 17, 2024Updated last year
- Primer design for ATAC-qPCR☆13Jan 11, 2022Updated 4 years ago
- Block-wise operations for large nD volumes☆46Updated this week
- NGFF-Converter is a GUI application for conversion of bioimage formats into OME-NGFF (Next-Generation File Format) or OME-TIFF☆35Mar 3, 2026Updated last month
- A template repo used to make new napari plugins☆37Apr 16, 2026Updated last week
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆31Mar 14, 2025Updated last year
- sciview is a tool for visualization and interaction with ND image and mesh data☆74Feb 26, 2026Updated 2 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆73Apr 6, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Raw format to OME-TIFF converter☆57Apr 22, 2026Updated last week
- A napari plugin for zarr backed OME-NGFF images☆49Apr 13, 2026Updated 2 weeks ago
- Preprocessing pipeline for (sc)ATAC data☆10Feb 22, 2022Updated 4 years ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆21Mar 12, 2026Updated last month
- Kitware Course in Biomedical Image Analysis and Visualization: ITK☆16Jan 3, 2025Updated last year
- ☆18Nov 25, 2025Updated 5 months ago
- ☆15Oct 19, 2023Updated 2 years ago