epam / cloud-pipelineLinks
Cloud agnostic genomics analysis, scientific computation and storage platform
☆157Updated this week
Alternatives and similar repositories for cloud-pipeline
Users that are interested in cloud-pipeline are comparing it to the libraries listed below
Sorting:
- The WES API is a standard way to run and manage portable workflows.☆88Updated 2 months ago
- An option to spin cost effective EMR clusters in AWS with Hail and JupyterNotebook installed☆18Updated 5 years ago
- Standard for describing and searching biomedical data developed by the Global Alliance for Genomics & Health.☆24Updated 2 years ago
- An app store for scientific workflows, tools, notebooks, and services☆130Updated this week
- ☆93Updated 2 months ago
- machine learning for genomic variants☆147Updated 3 weeks ago
- Taiga for Dataset management☆12Updated this week
- Easily launch cloud applications.☆42Updated last year
- Nextflow Tower system☆152Updated last year
- Automation for standing up Gen3 commons☆44Updated this week
- This repository implements converters and tools for working with NGS data in HPC or Hadoop cluster☆17Updated 7 years ago
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆27Updated this week
- Butler is a framework for running scientific workflows on public and academic clouds.☆70Updated 6 years ago
- Python library & CLI to create, view and edit PFB files☆12Updated last month
- A language server for Common Workflow Language☆66Updated 2 years ago
- This solution provides a framework for Next Generation Sequencing (NGS) genomics secondary-analysis pipelines using AWS Step Functions an…☆39Updated 2 years ago
- ☆40Updated last week
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Updated 9 years ago
- Python Scientific Pipeline Management System☆71Updated 2 years ago
- Python package to extend Airflow functionality with CWL1.1 support☆192Updated 2 years ago
- jinja2-enabled jupyter notebooks☆37Updated last week
- High performance data storage for importing, querying and transforming variants.☆99Updated 8 months ago
- A web application to view and share Common Workflow Language workflows☆48Updated this week
- biotoolsregistry: discovery portal for bioinformatics☆82Updated last week
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆41Updated 11 months ago
- Ansible playbook for managing Galaxy infrastructure. For the playbook managing Galaxy itself, see https://github.com/galaxyproject/usegal…☆12Updated last week
- This guidance creates a scalable environment in AWS to prepare genomic, clinical, mutation, expression and imaging data for large-scale a…☆24Updated 7 months ago
- Workflow Description Language compiler for the DNAnexus platform☆42Updated 2 years ago
- AuthN/AuthZ OIDC Service☆41Updated this week
- ☆86Updated last week