csgillespie / bmc-microarray
This repo contains the knitr code for the paper: Gillespie, C. S., et al, 2010. Analysing yeast time course microarray data using BioConductor: a case study using yeast2 Affymetrix arrays BMC Research Notes, 3:81.
☆13Updated 9 years ago
Alternatives and similar repositories for bmc-microarray:
Users that are interested in bmc-microarray are comparing it to the libraries listed below
- Workshop materials for cBioPortal Webinar 5: API & R Client☆19Updated 4 years ago
- Foundation of integer range manipulation in Bioconductor☆22Updated last month
- DEvis: an R package for aggregation and visualization of differential expression data☆20Updated 4 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 4 months ago
- Course website for Genomic Data Visualization 2024☆24Updated last year
- ☆25Updated 5 years ago
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆30Updated 6 months ago
- Foundation of vector-like and list-like containers in Bioconductor☆17Updated 2 months ago
- Development version of vioplot R package (CRAN maintainer)☆27Updated last month
- SummarizedBenchmark defines a flexible framework for benchmarking computational methods in R.☆15Updated 3 years ago
- An online companion to the OSCA manuscript demonstrating Bioconductor resources and workflows for single-cell RNA-seq analysis.☆36Updated 2 years ago
- ☆14Updated last year
- Clone of the Bioconductor repository for the basilisk package.☆27Updated 3 weeks ago
- Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap☆26Updated 4 years ago
- An R package for conducting co-localization analysis. Edit☆25Updated 5 years ago
- single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.☆20Updated 5 months ago
- SEQprocess: a modularized and customizable pipeline framework for NGS processing in R package☆17Updated 4 years ago
- R package for identifying differentially expressed genes from genome-wide gene expression profiling studies.☆21Updated 5 years ago
- Sample code for ldsc analyses in UKBB☆30Updated last year
- R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics☆12Updated 2 years ago
- Take command of your set enrichment analyses.☆21Updated this week
- ☆17Updated last year
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Updated last year
- A Tidy Tool for Phylogenetic Tree Data Manipulation☆56Updated 8 months ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- genetic correlation between phenotypes in the UK biobank☆12Updated last year
- 🦀 Tumor growth simulation in C++/R☆19Updated 3 weeks ago
- Introduction to Computational Biology☆32Updated 4 months ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 10 years ago
- Intro to workflows for efficient automated data analysis, using snakemake.☆32Updated 5 years ago