awslabs / genomics-secondary-analysis-using-aws-step-functions-and-aws-batchLinks
This solution provides a framework for Next Generation Sequencing (NGS) genomics secondary-analysis pipelines using AWS Step Functions and AWS Batch.
☆39Updated last year
Alternatives and similar repositories for genomics-secondary-analysis-using-aws-step-functions-and-aws-batch
Users that are interested in genomics-secondary-analysis-using-aws-step-functions-and-aws-batch are comparing it to the libraries listed below
Sorting:
- Genomics Workflows on AWS☆147Updated 2 years ago
- ☆147Updated last year
- Software sets up and runs an genome sequencing analysis workflow using AWS Batch and AWS Step Functions.☆202Updated 5 years ago
- This project contains the webapp sample integrated with AWS HealthOmics, which allows users such as admin and bioinformaticians to operat…☆19Updated 9 months ago
- ☆18Updated 2 years ago
- ☆36Updated last week
- ☆81Updated last month
- AWS Quick Start Team☆24Updated 10 months ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆69Updated last week
- This guidance creates a scalable environment in AWS to prepare genomic, clinical, mutation, expression and imaging data for large-scale a…☆24Updated 2 months ago
- ☆11Updated 4 years ago
- An option to spin cost effective EMR clusters in AWS with Hail and JupyterNotebook installed☆17Updated 5 years ago
- Workflow Description Language compiler for the DNAnexus platform☆41Updated 2 years ago
- Bioinformatics on GCP, AWS or Azure☆58Updated 2 months ago
- Nextflow Tower system☆151Updated 7 months ago
- ☆15Updated 5 years ago
- A cloud-based deployment of the 10x Genomics Cell Ranger software☆14Updated 6 years ago
- machine learning for genomic variants☆146Updated this week
- Source code and related materials for the O'Reilly book☆96Updated 3 years ago
- GCP Variant Transforms☆141Updated 2 months ago
- A scalable genome browser. Apache 2 licensed.☆125Updated 2 years ago
- GWAS Catalog Ontology and Curation Infrastructure☆26Updated 2 weeks ago
- Browser for ExAC consortium data☆106Updated 3 years ago
- Hummingbird: Efficient Performance Prediction for Executing Genomic Applications in the Cloud: https://doi.org/10.1093/bioinformatics/bta…☆20Updated last year
- ☆38Updated 2 years ago
- ☆19Updated 6 years ago
- Test data to be used for automated testing with the nf-core pipelines☆138Updated last week
- A collection of Python clients and accessory scripts for interacting with the Cromwell☆22Updated 2 years ago
- Infectious Disease Sequencing Platform☆87Updated 2 weeks ago
- simple jobs submission via command-line for AWS batch☆80Updated 6 years ago