genomics-dev / ukb-pretLinks
☆33Updated 6 months ago
Alternatives and similar repositories for ukb-pret
Users that are interested in ukb-pret are comparing it to the libraries listed below
Sorting:
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆110Updated last month
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆189Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆148Updated this week
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆67Updated last month
- MetaXcan software and manuscript☆170Updated last month
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆69Updated 4 years ago
- ☆84Updated last year
- Cross-population polygenic prediction☆86Updated 8 months ago
- PrediXcan Project☆112Updated 2 years ago
- Source code of FUMA GWAS web application☆57Updated last year
- Meta-analysis of genomewide association scans☆59Updated last year
- Polygenic prediction via continuous shrinkage priors☆184Updated 8 months ago
- UKB RAP Notebooks Genomics contains a collection of examples of how to use UK Biobank Genomics data on the Research Analysis Platform (RA…☆17Updated 10 months ago
- Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".☆15Updated 2 years ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆199Updated 11 months ago
- GREP: Genome for REPositioning drugs☆43Updated 2 years ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆122Updated 7 months ago
- Scripts to analyze TCGA data☆121Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆52Updated 2 months ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆27Updated last year
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆36Updated 8 months ago
- An R package to manipulate and explore UK Biobank data☆105Updated 2 years ago
- A tutorial on how to run basic polygenic risk score analysis☆80Updated 2 years ago
- A GPU version of SAIGE for full GRM GWAS analysis☆18Updated 2 weeks ago
- Genotype-based Prediction (GenoPred)☆72Updated this week
- A tool to build a website to browse hundreds or thousands of GWAS.☆183Updated last year
- Rapid standardisation and quality control of GWAS or QTL summary statistics☆85Updated 3 weeks ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 5 months ago