genomics-dev / ukb-pretLinks
☆33Updated 10 months ago
Alternatives and similar repositories for ukb-pret
Users that are interested in ukb-pret are comparing it to the libraries listed below
Sorting:
- UKB RAP Notebooks contains a collection of examples of how to use UK Biobank Research Analyses Platform (RAP).☆136Updated 5 months ago
- MetaXcan software and manuscript☆179Updated 5 months ago
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆72Updated 4 years ago
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆155Updated last month
- PrediXcan Project☆115Updated 3 years ago
- Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DN…☆212Updated last year
- Scripts and workflows for use analyzing UK Biobank data from the DNANexus Research Analysis Platform☆73Updated 5 months ago
- GREP: Genome for REPositioning drugs☆43Updated 2 years ago
- Source code of FUMA GWAS web application☆60Updated 2 years ago
- Cross-population polygenic prediction☆93Updated 3 weeks ago
- Meta-analysis of genomewide association scans☆63Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆62Updated last month
- UKB RAP Notebooks Genomics contains a collection of examples of how to use UK Biobank Genomics data on the Research Analysis Platform (RA…☆30Updated last year
- Data analysis scripts for "Atlas of plasma NMR biomarkers for health and disease in 118,461 individuals from the UK Biobank".☆17Updated 2 years ago
- Easily download publicly available GWAS summary statistics.☆76Updated 2 years ago
- Causal Mixture Model for GWAS summary statistics☆87Updated last month
- Tools for processing Nightingale NMR biomarker data in UK Biobank☆43Updated last week
- Genotype-based Prediction (GenoPred)☆76Updated last week
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆32Updated 2 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆54Updated last month
- A tutorial on how to run basic polygenic risk score analysis☆83Updated 2 years ago
- ☆98Updated last year
- Performs the Mendelian Randomization Pleiotropy RESidual Sum and Outlier (MR-PRESSO) method.☆94Updated 2 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆56Updated 4 years ago
- Repo for the R package coloc☆183Updated last week
- A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores☆201Updated last year
- A GPU version of SAIGE for full GRM GWAS analysis☆19Updated 4 months ago
- Reading, querying and writing GWAS summary data in VCF format☆91Updated 2 weeks ago
- PolyFun (POLYgenic FUNctionally-informed fine-mapping)☆127Updated last year