DNA/RNA pattern matching algorithm
☆21Aug 9, 2025Updated 7 months ago
Alternatives and similar repositories for seeq
Users that are interested in seeq are comparing it to the libraries listed below
Sorting:
- A git prompt for bash☆16Feb 19, 2026Updated last month
- MAGERI - Assemble, align and call variants for targeted genome re-sequencing with unique molecular identifiers☆22May 8, 2017Updated 8 years ago
- themes for base plots☆15May 15, 2018Updated 7 years ago
- VESPA: Very large-scale Evolutionary and Selective Pressure Analyses☆15Mar 18, 2022Updated 4 years ago
- A pipeline to assess the quantification of transcripts.☆19Jun 6, 2022Updated 3 years ago
- Ultra-fast 5' and 3' demultiplexer☆29Apr 23, 2024Updated last year
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19May 26, 2024Updated last year
- re-assembly and analysis of the Marine Microbial Eukaryotic Transcriptome Sequencing Project☆14Sep 18, 2018Updated 7 years ago
- RNA-Seq Unified Mapper☆27Sep 9, 2022Updated 3 years ago
- A Teaching Engine for Genomics☆12Mar 21, 2021Updated 4 years ago
- sbt plugin for scalaprops. provides tab completion, scala-native support☆12Mar 2, 2026Updated 2 weeks ago
- ☆15Aug 6, 2020Updated 5 years ago
- Implementation of CoNet in R☆16Oct 16, 2019Updated 6 years ago
- C++ API for various matrix types.☆15Feb 27, 2026Updated 3 weeks ago
- Bioinformatics / Explore oligonucleotide composition similarity between assembly contigs or scaffolds to detect contaminant DNA.☆12Feb 27, 2019Updated 7 years ago
- Useful links regarding aligning two Point Clouds☆16Jul 8, 2019Updated 6 years ago
- All pairs search and sequence clustering☆97Jun 14, 2022Updated 3 years ago
- A 'time'-like utility for Unix that measures peak memory usage☆18Jun 5, 2024Updated last year
- Scripts☆10Jun 29, 2016Updated 9 years ago
- Code for Shipman et al. 2017☆13Jul 12, 2017Updated 8 years ago
- How some homework solutions should work on some small examples☆12Aug 25, 2015Updated 10 years ago
- A Python library to work with high-throughput sequencing data in the context of data integration☆14May 24, 2017Updated 8 years ago
- DEPRECATED: Store and query public TCGA data☆11Sep 15, 2016Updated 9 years ago
- Rapid discovery of reciprocal best blast pairs.☆10Nov 9, 2024Updated last year
- A Python library for reading and writing PacBio® data files☆41Mar 6, 2026Updated 2 weeks ago
- long-read depth breaking☆11Apr 19, 2018Updated 7 years ago
- Template course website for the Designing a Data Science Classroom workshop at rstudio::conf(2022).☆11Jul 27, 2022Updated 3 years ago
- Flash2 has some improvements from flash_1 including new logic from innie and outie overlaps as well as some initial steps for flash for a…☆53Feb 7, 2018Updated 8 years ago
- An R package for the processing of plate reader and flow cytometry data. This includes: normalisation and calibration of plate reader dat…☆10Aug 12, 2025Updated 7 months ago
- ☆11Dec 1, 2020Updated 5 years ago
- mreps: software for tandem repeat identification in DNA☆15Nov 13, 2019Updated 6 years ago
- Software for hybridization capture bait design☆11Mar 20, 2024Updated 2 years ago
- Simple script for the command line to switch the color scheme of texshop.☆14Sep 25, 2014Updated 11 years ago
- An Optimized Nested TAD caller for Hi-C data☆25Jun 30, 2021Updated 4 years ago
- ☆14Dec 10, 2018Updated 7 years ago
- TADbit is a complete Python library to deal with all steps to analyze, model and explore 3C-based data. With TADbit the user can map FAST…☆109Nov 12, 2025Updated 4 months ago
- metagenome population recombination rate estimation pipeline☆12Nov 23, 2025Updated 3 months ago
- Code to generate re-assemblies of the Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP)☆23Apr 14, 2019Updated 6 years ago
- Real time data analysis tools for the minION sequencing platform.☆30Apr 12, 2022Updated 3 years ago