SPACE: STRING proteins as complementary embeddings
☆41Apr 10, 2026Updated 3 months ago
Alternatives and similar repositories for SPACE
Users that are interested in SPACE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Package to preprocess ontologies and train OntoVAE models.☆16Jan 7, 2025Updated last year
- Embeddings to Network Alignment - align biological networks between two species☆10Sep 8, 2023Updated 2 years ago
- Absolute quantification package based on quantms.io☆16Sep 25, 2025Updated 9 months ago
- ☆16Jul 13, 2022Updated 4 years ago
- ☆40Jul 3, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆149Aug 14, 2024Updated last year
- Code repository for the SPOC tool for scoring binary AF-M predicitons.☆15Apr 27, 2025Updated last year
- ☆15Mar 8, 2026Updated 4 months ago
- ☆28Aug 25, 2025Updated 10 months ago
- ☆19Oct 18, 2024Updated last year
- CancerFoundation: A single-cell RNA sequencing foundation model to decipher drug resistance in cancer☆30Sep 12, 2025Updated 10 months ago
- PathIntegrate Python package for pathway-based multi-omics data integration☆19Nov 9, 2024Updated last year
- ☆51Jun 16, 2025Updated last year
- Integrate Any Omics: Towards genome-wide data integration for patient stratification☆62May 19, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆87Jul 18, 2025Updated last year
- Causal Structure Learning and Network Analysis with Structural Equation Modeling.☆24Dec 18, 2025Updated 7 months ago
- IsoVis enables fast and informative visualization of isoform structures and expression levels.☆16Jun 19, 2026Updated last month
- A clusterability measure for scRNA-seq data.☆20Feb 2, 2022Updated 4 years ago
- ☆24Mar 1, 2023Updated 3 years ago
- Learning disentangled representations of single-cell data for high-quality generation☆16Mar 16, 2024Updated 2 years ago
- ☆155Nov 6, 2025Updated 8 months ago
- SIGnature is a Python package that empowers researchers to rapidly query gene sets across diverse single-cell RNA sequencing (scRNA-seq) …☆46May 27, 2026Updated last month
- Code to implement the hierarchical cross-entropy loss for single-cell annotation models☆22Updated this week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics☆15Updated this week
- ☆21Jun 5, 2017Updated 9 years ago
- HiDeF (Hierarchical community Decoding Framework)☆15Jan 30, 2024Updated 2 years ago
- Gene expression time-series extrapolation for heterogeneous data☆20Apr 29, 2023Updated 3 years ago
- TUnA: Transformer-based Uncertainty Aware model for PPI Prediction☆17Dec 21, 2025Updated 7 months ago
- CSCS User Lab Day – Meet the Swiss National Supercomputing Centre☆13Sep 12, 2025Updated 10 months ago
- ☆26Jan 10, 2025Updated last year
- A network based gene classification library to generate genome wide predictions about genes that are functionally similar to the input ge…☆21Jul 13, 2026Updated last week
- A web-browser app to visualise, interpret and prioritise genomic/transcriptomic structural variations (SVs) of multiple samples.☆14May 16, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- a framework for predicting global protein-protein interaction networks from dynamic mass spec data☆25Mar 20, 2024Updated 2 years ago
- ☆14Sep 3, 2024Updated last year
- Predicting ncRNA-protein interaction using high-level features based on deep learning☆15May 2, 2020Updated 6 years ago
- A post-clustering differential expression (DE) method robust to false-positive inflation caused by double dipping☆29Jul 15, 2026Updated last week
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆79Sep 6, 2023Updated 2 years ago
- ☆13Jun 16, 2025Updated last year
- A model developed for the generation of scRNA-seq data☆94Jan 21, 2026Updated 6 months ago