Alternatives and similar repositories for Sagittarius

Users that are interested in Sagittarius are comparing it to the libraries listed below

• KatarinaYuan / awesome-single-cell-foundation
  Paper collection for single cell foundation models
  ☆31Updated last year
• HanwenXuTHU / BioTranslatorProject
  ☆33Updated 2 years ago
• microsoft / zero-shot-scfoundation
  ☆72Updated 11 months ago
• mims-harvard / PINNACLE
  Contextual AI models for single-cell protein biology
  ☆88Updated 5 months ago
• myzhengSIMM / TranSiGen
  ☆30Updated 6 months ago
• jimmylihui / GenBench
  ☆22Updated 2 months ago
• OmicsML / CellPLM
  Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.
  ☆90Updated last year
• Genentech / PerturbQA
  ☆13Updated 5 months ago
• OmicsML / scDiff
  scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models
  ☆29Updated 11 months ago
• mims-harvard / PDGrapher
  Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks
  ☆28Updated 2 months ago
• theislab / chemCPA
  Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.
  ☆121Updated 6 months ago
• TencentAILabHealthcare / DNAGPT
  ☆43Updated last year
• Barabasi-Lab / COVID-19
  Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19
  ☆27Updated 4 years ago
• genbio-ai / AIDO
  AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…
  ☆115Updated 3 weeks ago
• yhchen1123 / CoGO
  CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure
  ☆17Updated 10 months ago
• snap-stanford / multiscale-interactome
  ☆67Updated 2 years ago
• QSong-github / SiGra
  Single-cell spatial elucidation through image-augmented graph transformer
  ☆33Updated 2 years ago
• fuxialexander / genomespy
  ☆13Updated 7 months ago
• bsml320 / VAEN
  A deep generative neural network based approach to impute drug response
  ☆21Updated 4 years ago
• Genentech / iterative-perturb-seq
  Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors
  ☆40Updated last year
• terry-r123 / RNABenchmark
  [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models
  ☆48Updated last year
• JieZheng-ShanghaiTech / KG4SL
  Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …
  ☆34Updated 2 years ago
• jsxlei / scCLIP
  ☆30Updated last year
• myinsilicom / iKraph
  ☆41Updated 3 months ago
• aaronwtr / PertEval
  Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.
  ☆27Updated last week
• Boom5426 / Awesome-Virtual-Cell
  Awesome-AI-Virtual-Cell
  ☆67Updated this week
• ruiyi-zhang / scPretrain
  scPretrain: Multi-task self-supervised learning for cell type classification
  ☆23Updated 3 years ago
• welch-lab / PerturbNet
  PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation
  ☆40Updated 3 weeks ago
• jingcheng-du / Gene2vec
  Gene2Vec: Distributed Representation of Genes Based on Co-Expression
  ☆122Updated 3 years ago
• EperLuo / scDiffusion
  A model developed for the generation of scRNA-seq data
  ☆68Updated 5 months ago