addiewc / Sagittarius
Gene expression time-series extrapolation for heterogeneous data
☆16Updated last year
Related projects: ⓘ
- ☆10Updated last year
- ☆33Updated last year
- Paper collection for single cell foundation models☆27Updated 6 months ago
- [RECOMB 2023] Official implementation of "Pisces: A combo-wise contrastive learning approach to synergistic drug combination prediction".☆13Updated 9 months ago
- Computational predictor of protein intrinsic disorder and its functions☆9Updated 9 months ago
- ☆14Updated 2 weeks ago
- ☆25Updated 6 months ago
- code repo for Set2Gaussian☆15Updated 4 years ago
- Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network …☆30Updated last year
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆61Updated 5 months ago
- ☆26Updated 6 months ago
- SSM-DTA: Breaking the Barriers of Data Scarcity in Drug-Target Affinity Prediction (Briefings in Bioinformatics 2023)☆47Updated 3 months ago
- ☆16Updated 2 years ago
- ☆69Updated last year
- Exploring Evolution-aware & free protein language models as protein function predictors☆57Updated last year
- Code and data for the Nature Machine Intelligence paper "Knowledge graph-enhanced molecular contrastive learning with functional prompt".☆10Updated last year
- PEER Benchmark, appear at NeurIPS 2022 Dataset and Benchmark Track (https://arxiv.org/abs/2206.02096)☆79Updated last year
- Contextualizing protein representations using deep learning on protein networks and single-cell data☆67Updated last week
- Structured Multi-task Learning for Molecular Property Prediction, AISTATS'22 (https://proceedings.mlr.press/v151/liu22e.html)☆13Updated 2 years ago
- ☆76Updated this week
- Research repo for AI aided drug discovery, de novo drug development and related topics☆33Updated 2 years ago
- ☆38Updated last year
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆83Updated 11 months ago
- ☆62Updated last year
- ☆13Updated 3 months ago
- Retrieved Sequence Augmentation for Protein Representation Learning☆41Updated 10 months ago
- Single-cell spatial elucidation through image-augmented graph transformer☆29Updated last year
- TxGNN: Zero-shot prediction of therapeutic use with geometric deep learning and clinician centered design☆62Updated 4 months ago
- CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure☆16Updated 2 years ago
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆48Updated 10 months ago