department-of-veterans-affairs / LeoLinks
The Leo framework - The VINCI-developed Natural Language Processing(NLP) infrastructure using UIMA.
☆23Updated 2 years ago
Alternatives and similar repositories for Leo
Users that are interested in Leo are comparing it to the libraries listed below
Sorting:
- Classes for ClinicalTrials.gov related projects☆47Updated 6 years ago
- Health NLP Examples☆89Updated 7 years ago
- A near real-time named-entity recognizer☆62Updated 5 months ago
- A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API☆173Updated 3 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆34Updated last year
- [in development]☆39Updated 4 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 5 years ago
- Basic Python 3 tools to interact with UMLS lexica☆124Updated 6 years ago
- Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and hea…☆55Updated 7 years ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆143Updated 2 weeks ago
- New approach to use Snomed-CT Concept using Word Embedding with Word2vec☆21Updated 6 years ago
- ☆98Updated 2 years ago
- A generator of synthetic psychiatric notes.☆17Updated 5 years ago
- ☆55Updated 5 years ago
- An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/☆108Updated last year
- Sample code that demonstrates the use of the NCBO REST services☆43Updated last year
- Provides backbone infrastructure elements for OHNLP toolsets.☆14Updated 7 months ago
- The goal of the current application is to extract Concept-Value pairs for metrics measured during an echocardiogram study. The input is a…☆17Updated 2 years ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆49Updated 2 months ago
- These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This…☆86Updated last year
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Updated 3 years ago
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆100Updated last year
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆104Updated last year
- CDM conversion of MIMIC dataset.☆17Updated 9 years ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆70Updated 3 weeks ago
- Public release of the DeepPhe analytic software☆30Updated 3 weeks ago
- An R package for evaluating phenotype algorithms.☆21Updated last month
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆64Updated 5 months ago
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆212Updated this week
- Semantic query and text mining tool☆21Updated 2 years ago