Alternatives and similar repositories for pyConTextNLP:

Users that are interested in pyConTextNLP are comparing it to the libraries listed below

• p2 / ClinicalTrialsNLP
  Classes for ClinicalTrials.gov related projects
  ☆47Updated 5 years ago
• chapmanbe / negex
  Automatically exported from code.google.com/p/negex
  ☆36Updated 2 years ago
• chb / py-umls
  Basic Python 3 tools to interact with UMLS lexica
  ☆124Updated 6 years ago
• text-machine-lab / CliNER
  Clinical Named Entity Recognition system (CliNER) is an open-source natural language processing system for named entity recognition in cl…
  ☆234Updated 4 years ago
• AnthonyMRios / pymetamap
  Python wraper for MetaMap
  ☆170Updated 4 years ago
• som-shahlab / ehr-rwe
  Weak supervision methods for extracting real world evidence from EHRs
  ☆33Updated 4 years ago
• ClarityNLP / ClarityNLP
  An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/
  ☆107Updated 11 months ago
• jianlins / PyRuSH
  init
  ☆12Updated 3 months ago
• ckbjimmy / clneg
  Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification
  ☆21Updated 5 years ago
• gmichalo / UmlsBERT
  ☆96Updated 3 years ago
• CogStack / MedCATtrainer
  A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.
  ☆79Updated this week
• LHNCBC / metamaplite
  A near real-time named-entity recognizer
  ☆59Updated 9 months ago
• CogStack / CogStack-SemEHR
  Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research
  ☆89Updated 2 years ago
• dirkweissenborn / ctakes-server
  A simple REST-server around ctakes clinical pipeline.
  ☆30Updated 8 years ago
• OHDSI / NLPTools
  [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis
  ☆32Updated last year
• clinicalml / ML-tools
  Miscellaneous tools for clinical ML
  ☆29Updated 7 years ago
• nlpie / biomedicus2
  Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.
  ☆44Updated last year
• gkotsis / negation-detection
  Negation detection NLP tool. If you use the code, please cite George Gkotsis, Sumithra Velupillai, Anika Oellrich, Harry Dean,…
  ☆55Updated 8 years ago
• umassbento / ehrbert
  A fine-tuned BERT using EHR notes.
  ☆14Updated 5 years ago
• clinicalml / prancer
  Platform enabling Rapid Annotation for Clinical Entity Recognition
  ☆50Updated 2 years ago
• noc-lab / clinical_concept_extraction
  Clinical Concept Extraction with Contextual Word Embedding
  ☆40Updated 4 years ago
• HHS / uts-rest-api
  A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API
  ☆172Updated 2 years ago
• jgc128 / mednli
  MedNLI - A Natural Language Inference Dataset For The Clinical Domain
  ☆126Updated 2 years ago
• kdpsingh / clinspacy
  Clinical Natural Language Processing using spaCy, scispacy, and medspacy
  ☆99Updated 10 months ago
• NachusS / Snomed2Vec
  New approach to use Snomed-CT Concept using Word Embedding with Word2vec
  ☆20Updated 6 years ago
• babylonhealth / medisim
  Medical Similarity Dataset creation from SNOMED
  ☆27Updated 2 years ago
• Tian312 / EliIE
  An information extraction system for free-text eligibility criteria
  ☆37Updated 6 years ago
• OHNLP / MedTagger
  MedTagger is a light weight clinical NLP system built upon Apache UIMA.
  ☆64Updated 3 months ago
• simonlevine / clinical-longformer
  ☆38Updated 2 years ago
• CrowdTruth / Medical-Relation-Extraction
  Crowdsourced ground truth for medical relation extraction.
  ☆69Updated 5 years ago