chapmanbe / pyConTextNLPLinks
☆98Updated 2 years ago
Alternatives and similar repositories for pyConTextNLP
Users that are interested in pyConTextNLP are comparing it to the libraries listed below
Sorting:
- Basic Python 3 tools to interact with UMLS lexica☆123Updated 6 years ago
- Classes for ClinicalTrials.gov related projects☆47Updated 6 years ago
- An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/☆108Updated last year
- Clinical Named Entity Recognition system (CliNER) is an open-source natural language processing system for named entity recognition in cl…☆234Updated 5 years ago
- A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API☆172Updated 3 years ago
- Automatically exported from code.google.com/p/negex☆36Updated 3 years ago
- A simple REST-server around ctakes clinical pipeline.☆30Updated 8 years ago
- Python wraper for MetaMap☆173Updated 5 years ago
- ☆219Updated 9 months ago
- Clinical Text Summarization with Syntax-Based Negation and Semantic Concept Identification☆21Updated 5 years ago
- New approach to use Snomed-CT Concept using Word Embedding with Word2vec☆20Updated 6 years ago
- Negation detection NLP tool. If you use the code, please cite George Gkotsis, Sumithra Velupillai, Anika Oellrich, Harry Dean,…☆54Updated 8 years ago
- Weak supervision methods for extracting real world evidence from EHRs☆34Updated 5 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆33Updated last year
- Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"☆248Updated 5 years ago
- System for Medical Concept Extraction and Linking☆417Updated last year
- spaCy pipeline object for negating concepts in text☆281Updated 3 months ago
- ☆55Updated 5 years ago
- Python library for Natural Language Preprocessing (NLPre)☆191Updated 2 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- Sample code that demonstrates the use of the NCBO REST services☆43Updated last year
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆158Updated 2 years ago
- Health NLP Examples☆89Updated 6 years ago
- ☆99Updated 3 years ago
- A simple interface to inspect, improve and add concepts to biomedical NER+L -> MedCAT.☆85Updated last month
- A near real-time named-entity recognizer☆61Updated 2 months ago
- Clinical Natural Language Processing using spaCy, scispacy, and medspacy☆100Updated last year
- Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.☆44Updated 2 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆69Updated 5 months ago
- Miscellaneous tools for clinical ML☆29Updated 7 years ago