department-of-veterans-affairs / EchoExtractor
The goal of the current application is to extract Concept-Value pairs for metrics measured during an echocardiogram study. The input is a text document to be processed. The output is a dataset where each record represent a Concept-Value relationship.
☆17Updated last year
Alternatives and similar repositories for EchoExtractor:
Users that are interested in EchoExtractor are comparing it to the libraries listed below
- The Leo framework - The VINCI-developed Natural Language Processing(NLP) infrastructure using UIMA.☆23Updated last year
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆60Updated 2 weeks ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆43Updated 5 months ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆64Updated 4 months ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- Oncology Working Group Repository☆56Updated last week
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆60Updated 2 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆65Updated 8 months ago
- Natural language processing pipeline for finding vitals signs in documents.☆11Updated last year
- ETUDE (Evaluation Tool for Unstructured Data and Extractions) is a Python-based tool that provides consistent evaluation options across a…☆12Updated 2 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆76Updated last week
- [in development]☆37Updated 3 years ago
- Leaf Clinical Data Explorer☆91Updated 4 months ago
- Snolytical - Health Data Analytics Demonstrator☆47Updated 2 months ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆80Updated 2 weeks ago
- A generator of synthetic psychiatric notes.☆16Updated 4 years ago
- Mapping the MIMIC-III database to the OMOP schema☆132Updated last year
- HMTL & Javascript for the front end for the SNOMED CT Browser.☆87Updated this week
- An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/☆107Updated last year
- Represent SNOMED CT in a different types of databases☆113Updated 2 months ago
- Easy-to-use tutorials for accessing SNOMED APIs within 5 min using various programming languages☆127Updated 2 months ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆62Updated last year
- ☆16Updated 6 years ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- Documentation and issue tracking for the emerging FHIR bulk data implementation guide☆75Updated 4 years ago
- A near real-time named-entity recognizer☆59Updated 10 months ago
- Provides backbone infrastructure elements for OHNLP toolsets.☆14Updated 3 months ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆106Updated last month
- This repository is not longer active. It used to have the only purpose of creating releases of the Standardized Vocabularies, i.e. the co…☆13Updated 4 years ago