OHDSI / PhenotypeLibraryLinks
A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohdsi-phenotype-library-announcements/16910
☆48Updated 6 months ago
Alternatives and similar repositories for PhenotypeLibrary
Users that are interested in PhenotypeLibrary are comparing it to the libraries listed below
Sorting:
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆64Updated 2 months ago
- An R package for performing various cohort diagnostics.☆47Updated last month
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆66Updated 2 weeks ago
- An R package for evaluating phenotype algorithms.☆21Updated last month
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆209Updated this week
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆33Updated 4 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆70Updated last month
- [in development]☆38Updated 4 years ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated last month
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆140Updated 3 weeks ago
- Oncology Working Group Repository☆57Updated 3 weeks ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆83Updated 5 months ago
- Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.☆49Updated last year
- An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.☆87Updated 2 weeks ago
- Data Ingestion and Harmonization☆45Updated last week
- HDR UK National Phenotype Library☆22Updated 2 years ago
- Mapping the MIMIC-III database to the OMOP schema☆142Updated last year
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆84Updated 2 weeks ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆53Updated this week
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated last year
- Shiny apps in this repository will be automatically deployed to the OHDSI Shiny server.☆27Updated 7 months ago
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆140Updated 2 weeks ago
- ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data☆295Updated 2 weeks ago
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆46Updated 4 months ago
- Repository of OHDSI Collaborative Research Protocols☆38Updated 2 years ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆38Updated last year
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 6 years ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆115Updated 7 months ago
- Course materials for OHDSI ETL tutorial☆52Updated this week
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆101Updated last year