OHDSI / PhenotypeLibraryLinks
A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohdsi-phenotype-library-announcements/16910
☆49Updated 2 months ago
Alternatives and similar repositories for PhenotypeLibrary
Users that are interested in PhenotypeLibrary are comparing it to the libraries listed below
Sorting:
- An R package for performing various cohort diagnostics.☆47Updated 3 months ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆64Updated 5 months ago
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆212Updated 2 weeks ago
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆70Updated last month
- An R package for evaluating phenotype algorithms.☆21Updated last month
- Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.☆50Updated last year
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆33Updated 6 months ago
- Oncology Working Group Repository☆58Updated 3 months ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆143Updated 3 weeks ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 4 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆72Updated 4 months ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆87Updated last week
- An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.☆87Updated last week
- The Book of OHDSI repository☆123Updated last year
- HDR UK National Phenotype Library☆23Updated 2 years ago
- [Under development] Assessment of Pre-trained Observational Large Language-models in OHDSI (APOLLO)☆14Updated last year
- [in development]☆39Updated 4 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆87Updated last month
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆46Updated 7 months ago
- Repository of OHDSI Collaborative Research Protocols☆39Updated 2 years ago
- Shiny apps in this repository will be automatically deployed to the OHDSI Shiny server.☆27Updated 10 months ago
- Usagi is an application to help create mappings between coding systems and the Vocabulary standard concepts.☆104Updated last year
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆142Updated last week
- R package to easily interface with OMOP-formatted EHR data.☆36Updated 5 years ago
- A package supporting the conversion from Synthea CSV to OMOP CDM☆119Updated 10 months ago
- Course materials for OHDSI ETL tutorial☆53Updated 2 months ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆73Updated last week
- Data Ingestion and Harmonization☆46Updated 3 months ago
- This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.☆84Updated 2 months ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆93Updated 2 years ago