OHDSI / StudyProtocolSandboxLinks
This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.
☆33Updated 2 months ago
Alternatives and similar repositories for StudyProtocolSandbox
Users that are interested in StudyProtocolSandbox are comparing it to the libraries listed below
Sorting:
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆65Updated last week
- Repository of OHDSI Collaborative Research Protocols☆38Updated 2 years ago
- An R package for performing various cohort diagnostics.☆46Updated 3 weeks ago
- An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.☆87Updated last month
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆140Updated 3 weeks ago
- Dynamic visualization of Electronic Health Record data in the OMOP framework☆29Updated 4 years ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆47Updated 4 months ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆64Updated last month
- An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.☆202Updated last week
- R package to easily interface with OMOP-formatted EHR data.☆36Updated 5 years ago
- An R package for evaluating phenotype algorithms.☆19Updated last week
- Machine-readable version of electronic health record phenotypes for Kuan V. and Denaxas S. et al.☆49Updated last year
- ARCHIVED Essential tools and utility functions to facilitate the data processing pipeline, data cleaning and data analysing of clinical…☆56Updated 3 years ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆82Updated 4 months ago
- OHDSI WebAPI contains all OHDSI services that can be called from OHDSI applications☆140Updated last week
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆53Updated last week
- [in development]☆37Updated 4 years ago
- Oncology Working Group Repository☆57Updated last week
- An R package that facilitates access to a variety of OMOP CDM sample data sets.☆46Updated 3 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 9 months ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆67Updated 5 months ago
- Use R to generate a database containing the UK Biobank data schemas from http://biobank.ctsu.ox.ac.uk/crystal/schema.cgi☆20Updated 4 years ago
- This is an R package and Java library for rendering parameterized SQL, and translating it to different SQL dialects.☆82Updated last week
- R package to streamline use of the AllofUs researcher workbench☆17Updated 3 months ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 3 years ago
- Shiny apps in this repository will be automatically deployed to the OHDSI Shiny server.☆27Updated 6 months ago
- HDR UK National Phenotype Library☆22Updated 2 years ago
- Collection of various biomedical data models in parseable formats.☆29Updated last month
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆31Updated 5 years ago