shamsbayzid / mimic-cdm
CDM conversion of MIMIC dataset.
☆16Updated 8 years ago
Alternatives and similar repositories for mimic-cdm:
Users that are interested in mimic-cdm are comparing it to the libraries listed below
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆30Updated 4 years ago
- Repository of OHDSI Collaborative Research Protocols☆37Updated last year
- Pilot model and converter for integration of radiology data into OMOP-CDM☆22Updated 5 years ago
- Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.☆76Updated 9 months ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆50Updated last year
- An R package for evaluating phenotype algorithms.☆17Updated 3 months ago
- The Leo framework - The VINCI-developed Natural Language Processing(NLP) infrastructure using UIMA.☆23Updated last year
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆61Updated 3 months ago
- A Docker container that includes the OHDSI WebAPI (running in Apache Tomcat) and the OHDSI web applications.☆10Updated 2 years ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆60Updated 3 months ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆98Updated 2 years ago
- An R package for performing various cohort diagnostics.☆42Updated 2 weeks ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆42Updated 3 months ago
- Demonstrates creating a healthcare data warehouse using the MIMIC-III dataset on Redshift, Spark on EMR and Lambda☆21Updated 5 years ago
- ☆26Updated 6 years ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆133Updated last week
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆32Updated 3 years ago
- ARCHIVED Essential tools and utility functions to facilitate the data processing pipeline, data cleaning and data analysing of clinical…☆55Updated 2 years ago
- [in development]☆37Updated 3 years ago
- Main OMOPonFHIR Settings☆45Updated 2 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- Interactive web site for reviewing the results of the Achilles R package.☆18Updated 2 years ago
- The PEDSnet Data Quality Assessment Toolkit (OMOP CDM)☆24Updated 3 years ago
- Mapping the MIMIC-III database to the OMOP schema☆130Updated 10 months ago
- Repository for OMOP CDM conventions as defined by THEMIS. These can be reference lists of concepts, pieces of standardized code for data …☆28Updated 2 months ago
- DQe-c is a tool for examining completeness in clinical research data repositories.☆8Updated 7 years ago
- ☆25Updated 9 months ago
- i2b2 server source code☆35Updated 2 weeks ago
- Collection of various biomedical data models in parseable formats.☆28Updated 3 months ago
- The errata lists the minor errors and typos that have been identified in the PCORnet Common Data Model (CDM) specification.☆12Updated 5 years ago