Basic Python 3 tools to interact with UMLS lexica
☆124Jan 10, 2019Updated 7 years ago
Alternatives and similar repositories for py-umls
Users that are interested in py-umls are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- UMLS in Python with MongoDB.☆18Dec 7, 2018Updated 7 years ago
- System for Medical Concept Extraction and Linking☆437Aug 12, 2024Updated last year
- Classes for ClinicalTrials.gov related projects☆48Aug 13, 2019Updated 6 years ago
- These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This…☆86Mar 26, 2026Updated 2 weeks ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆344Nov 9, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API☆173Aug 17, 2022Updated 3 years ago
- init☆13Dec 4, 2024Updated last year
- Medication Extraction and Reconciliation Knowledge Instrument☆13Dec 5, 2013Updated 12 years ago
- Python wrapper for UMLS REST API☆10Dec 17, 2018Updated 7 years ago
- Miscellaneous tools for clinical ML☆29Oct 21, 2017Updated 8 years ago
- A modern, lightweight medication sig parser.☆12Jan 21, 2025Updated last year
- Code for AMIA CRI 2016 paper "Learning Low-Dimensional Representations of Medical Concepts"☆250Aug 24, 2020Updated 5 years ago
- Supporting multi-center research requires combining data created in different data models; this community coordination project aims to pr…☆18Mar 27, 2020Updated 6 years ago
- UMLS Terminology Server☆19Jan 27, 2026Updated 2 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Runtime repository for the SNOMED CT Entity Linking challenge on DrivenData☆14Mar 5, 2024Updated 2 years ago
- Enhance SSR for Python☆14May 7, 2024Updated last year
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Jan 17, 2022Updated 4 years ago
- HaVoc a simple REST API to quickly build smart health apps powered by health/biomedical vocabularies.☆72Aug 17, 2016Updated 9 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆49Mar 20, 2024Updated 2 years ago
- A short tutorial to map biomedical free-text into UMLS concepts using MetaMap☆31Sep 7, 2023Updated 2 years ago
- Visualization of electronic medical records or other sequence event data.☆93Mar 8, 2019Updated 7 years ago
- Sample relational database load scripts and SQL queries for processing SNOMED CT-AU RF2 release files.☆18Jul 17, 2024Updated last year
- Winners of the SNOMED CT Entity Linking Challenge☆50Apr 11, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.☆44Mar 13, 2023Updated 3 years ago
- UMLS to SNOMED CT and ICD-10-CM mapping tool: A Python script for generating JSON files containing mappings between UMLS CUIs and SNOMED …☆15Feb 11, 2026Updated 2 months ago
- Representation of Clinical Practice Guideline Recommendations in FHIR☆18Updated this week
- Python tools for standardizing drug names to generic names.☆24Jun 7, 2023Updated 2 years ago
- ☆11Apr 7, 2021Updated 5 years ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Jul 14, 2020Updated 5 years ago
- Library for clinical NLP with spaCy.☆645Mar 31, 2026Updated last week
- Corpus of Online Medical EnTities: the cometA corpus☆51Mar 6, 2025Updated last year
- A tool for extracting plain text and internal Wikipedia links from Wikipedia dumps☆11Apr 18, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆101Feb 25, 2022Updated 4 years ago
- For icibm paper☆11Feb 23, 2017Updated 9 years ago
- ☆223Dec 11, 2024Updated last year
- Learning from Discharge Summaries to extract mentioned diagnoses using Hierarchical Attention Model☆34Dec 17, 2017Updated 8 years ago
- Medical Concept Annotation Tool☆528Jul 25, 2025Updated 8 months ago
- A rule-based Python module for spitting documents into sections.☆12Nov 14, 2020Updated 5 years ago
- Puppet module to provision Airbnb's Airflow☆20Jun 8, 2022Updated 3 years ago