These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.
☆86Mar 26, 2026Updated this week
Alternatives and similar repositories for umls2rdf
Users that are interested in umls2rdf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Rails application for biological ontologies☆23Mar 5, 2026Updated 3 weeks ago
- Estimate similarity of medical concepts based on Unified Medical Language System (UMLS)☆16Jan 17, 2022Updated 4 years ago
- Basic Python 3 tools to interact with UMLS lexica☆124Jan 10, 2019Updated 7 years ago
- Sketching out an RDF representation for FHIR☆44Jul 4, 2025Updated 8 months ago
- System for Medical Concept Extraction and Linking☆437Aug 12, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Open Targets Library ETL Pipeline | Apache Beam☆16May 5, 2021Updated 4 years ago
- Java library to map LOINC-encoded test results to Human Phenotype Ontology☆33Jan 16, 2024Updated 2 years ago
- Crowdsourced ground truth for medical relation extraction.☆69Mar 18, 2019Updated 7 years ago
- An exploratory, tutorial and analytical view of the Unified Medical Language System (UMLS) & the software/technologies provided via being…☆49Mar 20, 2024Updated 2 years ago
- The Semanticscience Integrated Ontology (SIO) provides a simple, integrated ontology of types and relations for rich description of objec…☆69Jul 23, 2025Updated 8 months ago
- 💠 An index for linked open data & standard knowledge descriptions (ontologies, vocabularies, shapes, queries, mappings)☆45Nov 6, 2023Updated 2 years ago
- OBO Organized Knowledge: Training materials for becoming an OBO engineer☆118Mar 18, 2026Updated last week
- D2Refine - A Metadata Harmonization and Validation Workbench☆18Mar 21, 2019Updated 7 years ago
- ☆71May 31, 2022Updated 3 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A python library for calculating semantic similarity between patients in N3C☆14Oct 5, 2022Updated 3 years ago
- RDF Tables in Rust☆17Aug 26, 2022Updated 3 years ago
- loinc2hpo Annotation Data☆26Aug 4, 2022Updated 3 years ago
- Classes for ClinicalTrials.gov related projects☆48Aug 13, 2019Updated 6 years ago
- A SPARQL query federator of heterogeneous data sources☆35Dec 16, 2022Updated 3 years ago
- Concept2vec Metrics for Evaluating Quality of Embeddings for Ontological Concepts☆15Oct 22, 2018Updated 7 years ago
- Stardog Clojure bindings☆12Aug 31, 2023Updated 2 years ago
- To automatically process a piece of data text to annotate it with relevant ontology concepts and return the annotations.☆19Mar 19, 2026Updated last week
- Adversarial Learning of Knowledge Embeddings for the Unified Medical Language System☆39Jan 21, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Materialize OWL existential relations☆21Mar 13, 2026Updated 2 weeks ago
- Web app and CLI tools for working with biomedical terminologies.☆11Mar 20, 2026Updated last week
- A web-based repository for distributed ontologies.☆35Aug 21, 2017Updated 8 years ago
- Knowledge graphs generation from unstructured text.☆72Jan 31, 2025Updated last year
- Human Phenotype Ontology Workbench☆22Sep 17, 2023Updated 2 years ago
- ☆17Nov 21, 2024Updated last year
- Utility functions for traversing the Medical Subject Heading (MeSH) ontology tree☆44Apr 17, 2019Updated 6 years ago
- Ontology Tutorial☆73Nov 22, 2022Updated 3 years ago
- A corpus of Biomedical papers annotated with mentions of UMLS entities.☆343Nov 9, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆13Jul 31, 2018Updated 7 years ago
- UMLS Graph database for semantic queries☆27Jan 11, 2023Updated 3 years ago
- a set of command line tools for OWL files powered by owl-api☆20May 29, 2019Updated 6 years ago
- Medical Similarity Dataset creation from SNOMED☆29Jul 14, 2022Updated 3 years ago
- Python wraper for MetaMap☆173Jul 22, 2020Updated 5 years ago
- A simple system for specifying OWL class design patterns for OBO-ish ontologies.☆47Dec 10, 2025Updated 3 months ago
- Drag and drop SPARQL queries and data ingestion for virtuoso and soon other SPARQL endpoints☆41Mar 13, 2025Updated last year