healthnlp / examples
Health NLP Examples
☆88Updated 6 years ago
Alternatives and similar repositories for examples:
Users that are interested in examples are comparing it to the libraries listed below
- A simple REST-server around ctakes clinical pipeline.☆30Updated 8 years ago
- Clinical Pipeline Engine using Apache cTAKES☆24Updated 9 years ago
- ☆98Updated last year
- Basic Python 3 tools to interact with UMLS lexica☆124Updated 6 years ago
- Classes for ClinicalTrials.gov related projects☆47Updated 5 years ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- The Leo framework - The VINCI-developed Natural Language Processing(NLP) infrastructure using UIMA.☆23Updated last year
- A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API☆172Updated 2 years ago
- A JSON-based rest service to process unstructured clinical text through a smart natural language processing system.☆51Updated 2 years ago
- Code for the old version of BioMedICUS, for the new version see the biomedicus3 repository.☆44Updated 2 years ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆60Updated 2 years ago
- ETUDE (Evaluation Tool for Unstructured Data and Extractions) is a Python-based tool that provides consistent evaluation options across a…☆12Updated 2 years ago
- An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/☆107Updated 11 months ago
- cTAKES Python API interface for the Default Clinical Pipeline☆15Updated 6 years ago
- ☆23Updated 5 years ago
- Public release of the DeepPhe analytic software☆30Updated 2 years ago
- An information extraction system for free-text eligibility criteria☆37Updated 6 years ago
- Way to run Uima Pipelines on Apache Spark☆10Updated 3 years ago
- Clinical Named Entity Recognition system (CliNER) is an open-source natural language processing system for named entity recognition in cl…☆234Updated 4 years ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- Code for manipulating the structure of UMLS files and converting ontologies or sets of ontologies into a graph structure.☆41Updated 4 years ago
- Easy-to-use tutorials for accessing SNOMED APIs within 5 min using various programming languages☆126Updated 2 months ago
- Represent SNOMED CT in a relational database☆82Updated 2 years ago
- Clinical Language Annotation Modeling and Processing toolkit☆16Updated 8 years ago
- a Python tool to extract and structure numeric lab test comparison statements from text☆22Updated last year
- The i2b2 data repository☆40Updated last week
- Clinical Text Mining☆12Updated 7 years ago
- clinical free text de-identification software☆41Updated 6 years ago
- Automatically exported from code.google.com/p/negex☆36Updated 2 years ago
- Mapping the MIMIC-III database to the OMOP schema☆132Updated last year