OHDSI / Aphrodite
[in development]
☆37Updated 3 years ago
Alternatives and similar repositories for Aphrodite:
Users that are interested in Aphrodite are comparing it to the libraries listed below
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆60Updated 2 years ago
- A repository to store, organize and maintain the content of the OHDSI Phenotype library. OHDSI Forum post https://forums.ohdsi.org/t/ohds…☆42Updated 4 months ago
- An R package for evaluating phenotype algorithms.☆17Updated 4 months ago
- Mapping the MIMIC-III database to the OMOP schema☆131Updated 11 months ago
- This repository is for developing study packages for OHDSI studies. Once completed, they can be moved to the StudyProtocols repository.☆32Updated 3 years ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆60Updated 4 months ago
- Surfacing Semantic Data from Clinical Notes in Electronic Health Records for Tailored Care, Trial Recruitment and Clinical Research☆89Updated 2 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆64Updated 3 months ago
- An R package for performing various cohort diagnostics.☆42Updated last month
- CDM conversion of MIMIC dataset.☆16Updated 8 years ago
- The repository for code and documentation produced by the N3C Phenotype and Data Acquisition workstream☆62Updated last year
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆32Updated last year
- An R package for generating features (covariates) for a cohort using data in the Common Data Model.☆62Updated 4 months ago
- The PCORnet Common Data Model (CDM) Forum guidance repository contains materials intended to support implementation efforts by data partn…☆30Updated 4 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆76Updated this week
- ACT COVID Ontology☆15Updated 3 years ago
- [In Development] An application to parse freetext inclusion criteria and produce a structured cohort definition that can be executed agai…☆64Updated 6 months ago
- Quick script to parse out medications from discharge summaries in MIMIC format. Not that this approach uses minimal NLP, and can be vatly…☆28Updated 7 years ago
- Data Ingestion and Harmonization☆43Updated 2 years ago
- Repository of OHDSI Collaborative Research Protocols☆38Updated last year
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Updated 2 years ago
- Dataset containing 7,025 discharge summary notes from the MIMIC III dataset annotated for 7 SBDHs☆14Updated 2 years ago
- ETL-CDMBuilder is a repo containing a .NET Core application to perform ETL to OMOP CDM for multiple databases☆50Updated last year
- Oncology Working Group Repository☆56Updated last week
- Python package for machine learning for healthcare using a OMOP common data model☆107Updated last year
- Pilot model and converter for integration of radiology data into OMOP-CDM☆22Updated 5 years ago
- Workproducts to ETL CMS datasets into OMOP Common Data Model☆100Updated 2 years ago
- Training materials for Vocabulary & CDM Tutorial.☆21Updated 5 years ago
- A generator of synthetic psychiatric notes.☆16Updated 4 years ago
- Leaf Clinical Data Explorer☆90Updated 3 months ago