Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and health outcomes of interest.
☆56Aug 26, 2018Updated 7 years ago
Alternatives and similar repositories for KnowledgeBase
Users that are interested in KnowledgeBase are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CausalTrail - a tool for performing causal reasoning using the do-calculus☆12Jun 9, 2021Updated 4 years ago
- This repository is not longer active. It used to have the only purpose of creating releases of the Standardized Vocabularies, i.e. the co…☆14Aug 12, 2020Updated 5 years ago
- Interactive web site for reviewing the results of the Achilles R package.☆18Dec 30, 2022Updated 3 years ago
- The Potential Drug-drug Interaction and Potential Drug-drug Interaction Evidence Ontology (DIDEO)☆15Oct 25, 2023Updated 2 years ago
- Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized re…☆43Apr 7, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers☆16Sep 28, 2020Updated 5 years ago
- A Knowledge Graph-based Semantic Database for Biomedical Sciences☆28Oct 18, 2018Updated 7 years ago
- ☆19Feb 2, 2017Updated 9 years ago
- Transforming SemRep Predications into an Open Biomedical Linked Data Resource☆11Jan 26, 2018Updated 8 years ago
- Files related to an insight data science project focused on predicting death in atherosclerosis patients from the MIMICIII database.☆11Mar 20, 2018Updated 8 years ago
- ☆72May 31, 2022Updated 3 years ago
- Scripts that Bio2RDF users have created to generate RDF versions of scientific datasets☆135Sep 20, 2021Updated 4 years ago
- Source code for "Transforming Question Answering Datasets Into Natural Language Inference Datasets"☆61Jun 4, 2019Updated 6 years ago
- A command line Java application for parsing MEDLINE XML files and inserting the data into a relational database☆19Aug 9, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.☆266May 14, 2026Updated last week
- migrates from swat-4-med-safety/SW-DDI-catalog/drug-drug-interactions☆39Oct 2, 2017Updated 8 years ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Feb 1, 2021Updated 5 years ago
- An R package for visualizing confounder control in meta-analyses☆11Jan 17, 2023Updated 3 years ago
- The public display of the homosaurus vocabulary.☆12Apr 22, 2026Updated last month
- SUNNYNLP at SemEval-2018 Task 10☆20Feb 2, 2019Updated 7 years ago
- Python wraper for MetaMap☆172Jul 22, 2020Updated 5 years ago
- Web application for clinical pharmacogenomic interpretation☆10Mar 3, 2017Updated 9 years ago
- Source code for Medical Concept Embedding with Time-Aware Embedding☆22Aug 21, 2019Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A repository of code samples in various languages that show how to use the UMLS Terminology Services REST API☆173Aug 17, 2022Updated 3 years ago
- Learning word representation jointly using a corpus and a knowledge base (KB)☆19Oct 19, 2018Updated 7 years ago
- Create interactive quizzes using Shiny and Rmarkdown☆16Aug 18, 2024Updated last year
- Transformer model for Portuguese language (Brazil pt_BR)☆16Apr 10, 2026Updated last month
- Sugarglider creates glyph maps to visualise spatio-temporal data with customisable ribbon and segment geometries.☆12Jan 10, 2025Updated last year
- Drugbank.ca xml file converted to a mysql database☆10Apr 28, 2015Updated 11 years ago
- OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies☆96Oct 3, 2023Updated 2 years ago
- Generating claims for zero-shot scientific fact checking☆32Mar 22, 2022Updated 4 years ago
- my list of starred github repos☆16Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Generate safety signal statistics from FDA FAERS data☆52Jun 15, 2024Updated last year
- The phenogrid widget☆14Mar 4, 2023Updated 3 years ago
- Semantics for COVID-19 Discovery☆41Jul 27, 2020Updated 5 years ago
- Using Machine Learning and Neural Nets to predict NCAA basketball point spreads.☆17Mar 12, 2020Updated 6 years ago
- A Pytorch implementation of "Knowledge-Enhanced Ensemble Learning for Word Embeddings" (WWW 2019)☆37Sep 2, 2019Updated 6 years ago
- Classes for ClinicalTrials.gov related projects☆47Aug 13, 2019Updated 6 years ago
- Automated Characterization of Health Information at Large-scale Longitudinal Evidence Systems (ACHILLES) - descriptive statistics about a…☆147Dec 2, 2025Updated 5 months ago