Provides backbone infrastructure elements for OHNLP toolsets.
☆14May 6, 2025Updated 9 months ago
Alternatives and similar repositories for Backbone
Users that are interested in Backbone are comparing it to the libraries listed below
Sorting:
- Master Documentation Repository for OHNLP Projects Related to Coronavirus Disease 2019☆21Dec 8, 2022Updated 3 years ago
- MedTagger is a light weight clinical NLP system built upon Apache UIMA.☆71May 5, 2025Updated 9 months ago
- A near real-time named-entity recognizer☆64Feb 18, 2026Updated last week
- A Serverless Text Annotation Tool for Corpus Development☆59Feb 19, 2025Updated last year
- Python package for converting FHIR as JSON into flat files (CSVs)☆34Oct 23, 2025Updated 4 months ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆34Jan 2, 2024Updated 2 years ago
- Repository for discussion of OpenSAFELY codelists☆10Sep 10, 2024Updated last year
- QPP Measures Data☆97Feb 19, 2026Updated last week
- This repository contains my slides and references for a presentation to the UW eScience Institute on using Docker for reproducible resear…☆10Feb 11, 2015Updated 11 years ago
- An R package implementing Large-Scale Evidence Generation and Evaluation in a Network of Databases (LEGEND).☆10Dec 18, 2020Updated 5 years ago
- Submission for CS50x online course by Harvard University☆11Aug 7, 2014Updated 11 years ago
- Simple model for sentence compression (a.k.a Baseline in Klerke et al., NAACL 2016)☆10Dec 16, 2018Updated 7 years ago
- Sample relational database load scripts and SQL queries for processing SNOMED CT-AU RF2 release files.☆18Jul 17, 2024Updated last year
- A modern, lightweight medication sig parser.☆12Jan 21, 2025Updated last year
- Service to evaluate quality measure and cohort specifications against a target patient data set.☆11Jun 2, 2022Updated 3 years ago
- Data Standards Hackathon for NGS based typing.☆14Feb 2, 2026Updated 3 weeks ago
- Originally developed for FHIR DevDays 2020☆11May 5, 2021Updated 4 years ago
- SQLAlchemy models and DDL and ERD generation from chop-dbhi/data-models style JSON endpoints.☆11May 22, 2023Updated 2 years ago
- Streamlit template for building SMART on FHIR apps in the Cerner ecosystem.☆11Sep 22, 2023Updated 2 years ago
- Maps Medicare LDS claims data to the Tuva Input Layer so you can easily run the Tuva Project.☆11Dec 15, 2025Updated 2 months ago
- An R package for interfacing with a WebAPI instance☆10Sep 5, 2025Updated 5 months ago
- Leaf Clinical Data Explorer☆100Nov 3, 2025Updated 3 months ago
- ☆11Apr 26, 2025Updated 10 months ago
- Google Flan T5☆11Feb 5, 2023Updated 3 years ago
- Natural Language to SQL Queries in the OMOP CDM Datasets☆11Jun 12, 2023Updated 2 years ago
- This connector is a dbt project that maps Medicare CCLF claims data to the Tuva Input Layer.☆14Feb 16, 2026Updated last week
- Project Design Review Checklist☆13Sep 22, 2018Updated 7 years ago
- Download and load MIMIC-III into a PostgreSQL DB on an Ubuntu VM☆10Jul 3, 2016Updated 9 years ago
- NPM module for calculating eCQMs (electronic clinical quality measures) written in CQL (clinical quality language).☆10Dec 11, 2025Updated 2 months ago
- Keyword Extraction for Pathology Reports with BERT☆12Sep 2, 2020Updated 5 years ago
- Build project for all CEDAR Java repositories☆12Oct 20, 2025Updated 4 months ago
- computational training at Fred Hutch☆12Jun 11, 2021Updated 4 years ago
- ICD-10 nternational Statistical Classification of Diseases and Related Health Problems - Ground Truth and some Experimental R Code for N…☆14May 14, 2018Updated 7 years ago
- Word embeddings trained on medical subreddits.☆10Jan 4, 2021Updated 5 years ago
- A repository containing notebooks from my talk at PyData Seattle☆10Jul 7, 2017Updated 8 years ago
- ☆21Jul 25, 2014Updated 11 years ago
- Runs CQL phenotype definitions against an OMOP repository☆12Apr 14, 2023Updated 2 years ago
- Python wrapper for UMLS REST API☆10Dec 17, 2018Updated 7 years ago
- A little demo how to bind an advanced data science algorithms to 4 different languages☆10Nov 6, 2018Updated 7 years ago