dellytools / mazeLinks
maze: match visualizer
☆9Updated 3 years ago
Alternatives and similar repositories for maze
Users that are interested in maze are comparing it to the libraries listed below
Sorting:
- Hidden Markov Model based Copy number caller☆20Updated 9 months ago
- A framework to annotate SVs with previous known SVs (vcf file) and or with genomic features (gff and or bed files)☆13Updated 7 years ago
- ☆14Updated last year
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Updated 6 years ago
- Linear-time, low-memory construction of variation graphs☆20Updated 5 years ago
- Variant call adjudication☆16Updated last year
- ☆9Updated 3 years ago
- A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.☆18Updated 3 weeks ago
- Detects human contamination in bam files☆16Updated 4 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆17Updated 5 years ago
- Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]☆12Updated last year
- ☆22Updated 8 months ago
- ☆20Updated last year
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 5 months ago
- Bam Read Index - Extract alignments from a bam file by readname☆27Updated last year
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆24Updated last year
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆24Updated 6 years ago
- Split a BAM file by haplotype support☆16Updated 7 years ago
- PopSTR - A Population based microsatellite genotyper