Structure Harvester is a program for parsing the output of Pritchard's STRUCTURE and for performing the Evanno method.
☆35Jul 9, 2022Updated 4 years ago
Alternatives and similar repositories for structureHarvester
Users that are interested in structureHarvester are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Easy353 is a tool for recovering Angiosperms353 gene set.☆12Jul 29, 2025Updated last year
- Pipelines to run STRUCTURE using multiple front-ends (CLUMPAK+StrAuto, Structure_threader)☆13Oct 5, 2020Updated 5 years ago
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 8 years ago
- D3 based visualisation for comparative genomics☆15Oct 6, 2016Updated 9 years ago
- GeneMiner2 is an enhanced version of our previous developments Easy353 and GeneMiner☆19Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Mar 4, 2025Updated last year
- MultiBreak-SV identifies structural variants from next-generation paired end data, third-generation long read data, or data from a combin…☆12Jul 19, 2016Updated 10 years ago
- Pipeline for poreathon☆14Dec 17, 2014Updated 11 years ago
- Software GMATA for SSR mining, marker designing, genotyping, plot etc.☆18Oct 6, 2025Updated 10 months ago
- Fast and accurate tool for estimating genomic distances between genome-skims☆47Sep 28, 2023Updated 2 years ago
- R front-end for TASSEL 5☆34Aug 10, 2026Updated 3 weeks ago
- TESS3 is a fast and efficient program for estimating spatial population structure based on geographically constrained non-negative matrix…☆24Jun 21, 2023Updated 3 years ago
- Accurate Species TRee ALgorithm☆280Apr 1, 2024Updated 2 years ago
- A variational framework for inferring population structure from SNP genotype data.☆143Jan 6, 2023Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Accurate microsatellite genotypes from high-throughput resequencing data☆24Sep 26, 2014Updated 11 years ago
- Bash scripts for analysis of Hyb-Seq data (from raw reads to species trees/networks)☆20Aug 17, 2026Updated 2 weeks ago
- ☆26Aug 10, 2021Updated 5 years ago
- Statistical methods for forest genetic resources analysts☆39Aug 10, 2026Updated 3 weeks ago
- a flexible tool for microsatellite investigation and visualization☆10Jun 15, 2026Updated 2 months ago
- GeneMiner: a tool for extracting phylogenetic markers from next-generation sequencing data☆11Feb 22, 2024Updated 2 years ago
- Kasahara lab. public repository.☆14Updated this week
- ☆36Dec 24, 2020Updated 5 years ago
- Population Genomics in R workshop☆13Mar 24, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆151Dec 22, 2025Updated 8 months ago
- Shell script for install different R-(3.X.X) versions from source.☆11Jul 11, 2017Updated 9 years ago
- A wrapper program to parallelize and automate runs of "Structure", "fastStructure" and "MavericK".☆26Jul 15, 2026Updated last month
- Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species☆191Dec 19, 2024Updated last year
- Rapid competitive read demulitplexer. Made with tries.☆23May 19, 2025Updated last year
- Contig Ploidy and Allele Dosage Estimation☆12Oct 30, 2015Updated 10 years ago
- Scripts for population genetics analysis☆21Nov 10, 2022Updated 3 years ago
- Accurate haplotype construction and detection of selection signatures enabled by 889 high quality pig genome sequences☆14May 11, 2023Updated 3 years ago
- MP-EST estimates species trees from a set of gene trees by maximizing a pseudo-likelihood function☆13Oct 31, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- GS3, software for genomic prediction and whole genome Bayesian analysis☆10Dec 18, 2017Updated 8 years ago
- CGView is a Java package for generating high-quality, zoomable maps of circular genomes.☆57Mar 2, 2026Updated 6 months ago
- 1st place solution of the Global Wheat Challenge 2021, by randomTeamName☆26Jun 16, 2022Updated 4 years ago
- Work for the tree sequence inference paper.☆23Oct 19, 2020Updated 5 years ago
- Assessing confidence in introgression among four populations☆29Apr 19, 2021Updated 5 years ago
- ASTRAL for PaRalogs and Orthologs☆24Sep 13, 2022Updated 3 years ago
- Implementation of a polymorphism aware phylogenetic model using HYPHY☆19Jan 14, 2022Updated 4 years ago