Alternatives and similar repositories for structureHarvester

Users that are interested in structureHarvester are comparing it to the libraries listed below

• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆149Updated 2 years ago
• dipetkov / eems
  Estimating Effective Migration Surfaces
  ☆106Updated last year
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆195Updated 8 months ago
• VascoElbrecht / JAMP
  JAMP - Just Another Metabarcoding Pipeline
  ☆37Updated 3 years ago
• grunwaldlab / Population_Genetics_in_R
  A primer for computational tools to analyze genetics of populations in R
  ☆88Updated 4 years ago
• ddarriba / jmodeltest2
  Automatically exported from code.google.com/p/jmodeltest2
  ☆81Updated 4 years ago
• roblanf / sangeranalyseR
  functions to analyse sanger sequencing reads in R
  ☆102Updated 7 months ago
• picrust / picrust
  Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…
  ☆91Updated last month
• jpuritz / dDocent
  a bash pipeline for RAD sequencing
  ☆55Updated 8 months ago
• TickingClock1992 / RIdeogram
  ☆183Updated 5 years ago
• Capblancq / RDA-landscape-genomics
  ☆30Updated 3 years ago
• tobiasgf / lulu
  r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)
  ☆71Updated last year
• yhwu / idemp
  Barcode demultiplex for Illumina I1, R1, R2 fastq.gz files
  ☆32Updated 8 years ago
• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆65Updated 2 years ago
• bakeronit / acropora_digitifera_wgs
  ☆11Updated last year
• uit-metabarcoding / MJOLNIR
  MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R
  ☆18Updated last month
• Russel88 / MicEco
  Various functions for analysis of microbial community data
  ☆46Updated last week
• yiluheihei / microbiomeMarker
  R package for microbiome biomarker discovery
  ☆190Updated 7 months ago
• frederic-mahe / swarm
  A robust and fast clustering method for amplicon-based studies
  ☆31Updated 2 years ago
• gdlc / BGLR-R
  ☆109Updated this week
• bulksoil / BioProtocol
  Repo for a Microbiome Protocol
  ☆10Updated 7 years ago
• AntonelliLab / seqcap_processor
  Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics
  ☆22Updated 2 years ago
• pgugger / LandscapeGenomics
  Tutorials for bioinformatics and data analysis related to landscape genomics
  ☆29Updated 6 years ago
• mfumagalli / ngsTools
  Programs to analyse NGS data for population genetics purposes
  ☆177Updated last year
• VascoElbrecht / PrimerMiner
  R mased batch sequence downloader, with primer development and in silico evaluation capabilities
  ☆36Updated 11 months ago
• lch14forever / microbiomeViz
  Visualize microbiome data with black magic ggtree
  ☆68Updated 5 years ago
• FrederickHuangLin / ANCOMBC
  Differential abundance (DA) and correlation analyses for microbial absolute abundance data
  ☆125Updated last month
• Tom-Jenkins / mapmixture
  R package and web app for spatial visualisation of admixture on a projected map
  ☆44Updated 6 months ago
• emmanuelparadis / pegas
  Population and Evolutionary Genetics Analysis System
  ☆29Updated 7 months ago
• UMNFuN / FUNGuild
  FUNGuild: parsing OTUs into functional guilds
  ☆120Updated last year