☆19Feb 24, 2026Updated 6 months ago
Alternatives and similar repositories for HiReNET
Users that are interested in HiReNET are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Sep 4, 2024Updated 2 years ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- BRAKER re-implemented with snakemake☆84Sep 3, 2026Updated 2 weeks ago
- HiCAT new project☆39May 18, 2025Updated last year
- ☆21Jul 12, 2026Updated 2 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Centromics: visualing centromeres with multiple omics data☆27Mar 4, 2025Updated last year
- ☆24Feb 26, 2026Updated 6 months ago
- Tidyverse workshop series materials☆16May 3, 2022Updated 4 years ago
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆20May 17, 2023Updated 3 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆23Aug 12, 2026Updated last month
- Repository containing data analysis scripts and figures for the FungAMR paper.☆15Updated this week
- An R package for predicting ploidal level from sequence data using site-based heterozygosity☆19Aug 30, 2026Updated 2 weeks ago
- Convert Tandem Repeat Finder dat file output into gff3 format☆32Sep 7, 2026Updated last week
- Recovery of eukaryotic genomes using contrastive learning. A specialized metagenomic binning tool designed for recovering high-quality eu…☆26Updated this week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A tool for scanning FASTA protein sequences against a library of Pfam HMMs☆29Aug 23, 2022Updated 4 years ago
- ☆23Aug 8, 2024Updated 2 years ago
- Simple web browser to visualize HiC tracks☆19Dec 12, 2019Updated 6 years ago
- We report a section-wide NLRome for the tuber-bearing section Petota, including the most important non-cereal food crop potato. Evolution…☆23Oct 31, 2025Updated 10 months ago
- 黄金矿工微信小游戏,Cocos Creator2.4.5☆11Dec 26, 2021Updated 4 years ago
- A user-friendly tool to screen antimicrobial resistance in fungal genomes☆21May 8, 2026Updated 4 months ago
- ☆16Mar 8, 2024Updated 2 years ago
- A tool for plotting CAFE5 gene family expansion/contraction result☆37Sep 22, 2023Updated 2 years ago
- A haplotype analysis toolkit for natural variation study.☆36Oct 3, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆10Jan 27, 2025Updated last year
- Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.☆15Apr 28, 2026Updated 4 months ago
- TQSLE v1.0 released☆10Aug 29, 2023Updated 3 years ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆51Jan 16, 2024Updated 2 years ago
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆113Nov 17, 2025Updated 10 months ago
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆12Dec 7, 2022Updated 3 years ago
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Sep 24, 2024Updated last year
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆49Jul 23, 2025Updated last year
- This is the script used for analysis the population data of alfalfa☆11May 22, 2024Updated 2 years ago
- TransAnnot - a fast transcriptome annotation pipeline☆20Jan 22, 2025Updated last year
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- This is a method to find telomeres and centromeres in plants.☆43Jun 17, 2023Updated 3 years ago
- Centromics: visualing centromeres with multiple omics data☆21Jan 18, 2024Updated 2 years ago
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated 2 years ago