☆19Feb 24, 2026Updated 4 months ago
Alternatives and similar repositories for HiReNET
Users that are interested in HiReNET are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Sep 4, 2024Updated last year
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆14Apr 28, 2020Updated 6 years ago
- ☆19Jul 12, 2026Updated last week
- ☆24Feb 26, 2026Updated 4 months ago
- Centromics: visualing centromeres with multiple omics data☆27Mar 4, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Tidyverse workshop series materials☆16May 3, 2022Updated 4 years ago
- Use hifi to assembly the Sol genome, and dissecting Sol evo☆20May 17, 2023Updated 3 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆22Updated this week
- Repository containing data analysis scripts and figures for the FungAMR paper.☆15Updated this week
- Recovery of eukaryotic genomes using contrastive learning. A specialized metagenomic binning tool designed for recovering high-quality eu…☆19Updated this week
- Convert Tandem Repeat Finder dat file output into gff3 format☆32Nov 9, 2025Updated 8 months ago
- Simple web browser to visualize HiC tracks☆19Dec 12, 2019Updated 6 years ago
- ☆23Aug 8, 2024Updated last year
- We report a section-wide NLRome for the tuber-bearing section Petota, including the most important non-cereal food crop potato. Evolution…☆23Oct 31, 2025Updated 8 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A user-friendly tool to screen antimicrobial resistance in fungal genomes☆20May 8, 2026Updated 2 months ago
- 黄金矿工微信小游戏,Cocos Creator2.4.5☆11Dec 26, 2021Updated 4 years ago
- ☆16Mar 8, 2024Updated 2 years ago
- A tool for plotting CAFE5 gene family expansion/contraction result☆37Sep 22, 2023Updated 2 years ago
- A haplotype analysis toolkit for natural variation study.☆35Oct 3, 2023Updated 2 years ago
- ☆10Jan 27, 2025Updated last year
- Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.☆14Apr 28, 2026Updated 2 months ago
- TQSLE v1.0 released☆10Aug 29, 2023Updated 2 years ago
- LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences.☆50Jan 16, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆114Nov 17, 2025Updated 8 months ago
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆11Dec 7, 2022Updated 3 years ago
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- HaploSweep is a method for detecting and categorizing soft and hard selective sweeps based on haplotype structure.☆11Sep 24, 2024Updated last year
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Computational Analysis of Gene Expression Evolution☆49Apr 17, 2026Updated 3 months ago
- This is the script used for analysis the population data of alfalfa☆11May 22, 2024Updated 2 years ago
- TransAnnot - a fast transcriptome annotation pipeline☆20Jan 22, 2025Updated last year
- An R package for comparative transcriptomic analyses of hybrids and their progenitors☆17Sep 5, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- BRAKER re-implemented with snakemake☆74Jul 8, 2026Updated last week
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- This is a method to find telomeres and centromeres in plants.☆43Jun 17, 2023Updated 3 years ago
- Centromics: visualing centromeres with multiple omics data☆21Jan 18, 2024Updated 2 years ago
- Run_dbcan V5☆65May 27, 2026Updated last month
- This pipeline is used to distinguish allotetraploid subgenomes.☆11Apr 8, 2024Updated 2 years ago
- Code repository for the Global Ant Genomics Alliance☆18Jun 16, 2025Updated last year