Alternatives and similar repositories for PECAN

Users that are interested in PECAN are comparing it to the libraries listed below

• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆75Updated 5 years ago
• dahjan / DMS_opt
  ☆73Updated 5 years ago
• Liuxg16 / GeoPPI
  ☆90Updated 3 years ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• jertubiana / ScanNet
  ☆137Updated 6 months ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆137Updated 3 years ago
• FTD007 / PInet
  ☆25Updated 3 years ago
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆61Updated 2 years ago
• wengong-jin / abdockgen
  ☆108Updated 2 years ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆122Updated last week
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆56Updated 5 months ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆65Updated 2 years ago
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆159Updated 3 weeks ago
• DeepGraphLearning / GearBind
  Pretrainable geometric graph neural network for antibody affinity maturation
  ☆70Updated 9 months ago
• TencentAI4S / IgGM
  Official Implementation of IgGM
  ☆173Updated last month
• HBioquant / DiffBindFR
  Diffusion model based protein-ligand flexible docking method
  ☆116Updated last year
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆74Updated 4 years ago
• MSBMI-SAFE / AbBiBench
  AbBiBench (Antibody Binding Benchmarking), a benchmarking framework for optimizing antibody binding affinity.
  ☆34Updated 2 months ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆46Updated 2 years ago
• HeliXonProtein / binding-ddg-predictor
  open source repository
  ☆143Updated 2 years ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆167Updated last month
• dina-lab3D / NanoNet
  ☆51Updated 2 years ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆168Updated 3 months ago
• idlutz / protein-backbone-MCTS
  ☆52Updated last year
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆50Updated 2 years ago
• hiranumn / DeepAccNet
  Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
  ☆90Updated 4 years ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆69Updated 5 months ago
• samsledje / ConPLex_dev
  ☆54Updated last year
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 3 years ago
• sarahsirin / AB-Bind-Database
  Antibody Binding Mutational Database
  ☆38Updated 6 years ago