vamships / PECANLinks
Help file for running the scripts to learn and evaluate graph convolution networks for epitope and paratope prediction
☆34Updated 5 years ago
Alternatives and similar repositories for PECAN
Users that are interested in PECAN are comparing it to the libraries listed below
Sorting:
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 4 years ago
- ☆86Updated 3 years ago
- ☆72Updated 5 years ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆37Updated 2 years ago
- Fitness landscapes for antibodies☆89Updated last month
- ☆107Updated 2 years ago
- ☆127Updated 3 years ago
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆90Updated 4 years ago
- ☆134Updated 4 months ago
- Antibody Binding Mutational Database☆36Updated 6 years ago
- Masif seed paper repository☆163Updated last month
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- ☆25Updated 3 years ago
- Predict the structure of immune receptor proteins☆163Updated 9 months ago
- Antibody-specific masked language model☆62Updated 2 years ago
- Diffusion model based protein-ligand flexible docking method☆114Updated last year
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆151Updated 2 weeks ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆128Updated 6 months ago
- ☆70Updated 4 years ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆66Updated 3 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆47Updated 2 years ago
- A bunch of shell utilities for dealing the silent files☆68Updated 3 weeks ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆51Updated 3 months ago
- Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide☆23Updated 2 years ago
- ☆10Updated 2 years ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆65Updated 7 months ago
- ☆139Updated 3 months ago
- Official Implementation of IgGM☆148Updated last week
- ☆50Updated last year
- Convenience Python APIs for antibody numbering using ANARCI☆107Updated 5 months ago