Alternatives and similar repositories for PECAN

Users that are interested in PECAN are comparing it to the libraries listed below

• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• dahjan / DMS_opt
  ☆69Updated 4 years ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆71Updated 4 years ago
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆59Updated 2 years ago
• FTD007 / PInet
  ☆25Updated 3 years ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆31Updated 2 months ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆73Updated 5 months ago
• Liuxg16 / GeoPPI
  ☆86Updated 2 years ago
• sarahsirin / AB-Bind-Database
  Antibody Binding Mutational Database
  ☆32Updated 6 years ago
• dina-lab3D / NanoNet
  ☆46Updated last year
• Kuhlman-Lab / evopro
  ☆81Updated last week
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆42Updated 2 years ago
• mit-ll / AlphaSeq_Antibody_Dataset
  Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide
  ☆22Updated 2 years ago
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆45Updated last year
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆64Updated 3 years ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆56Updated last month
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆48Updated 2 years ago
• Fleishman-Lab / CUMAb
  ☆19Updated 2 months ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆55Updated last year
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆42Updated 6 months ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 11 months ago
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆62Updated last month
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated last year
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated 10 months ago
• wengong-jin / abdockgen
  ☆106Updated 2 years ago
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆25Updated 11 months ago
• nkmiller / protein_interactions
  ☆9Updated 2 years ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆117Updated 2 years ago
• idlutz / protein-backbone-MCTS
  ☆49Updated last year