Alternatives and similar repositories for PECAN:

Users that are interested in PECAN are comparing it to the libraries listed below

• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆35Updated 2 years ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• FTD007 / PInet
  ☆25Updated 3 years ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆70Updated 4 years ago
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆58Updated last year
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆51Updated last year
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆67Updated 2 months ago
• Liuxg16 / GeoPPI
  ☆82Updated 2 years ago
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆47Updated 3 months ago
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆45Updated 4 months ago
• wengong-jin / abdockgen
  ☆105Updated 2 years ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆28Updated 3 weeks ago
• idlutz / protein-backbone-MCTS
  ☆47Updated 9 months ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆25Updated 8 months ago
• bcov77 / silent_tools
  A bunch of shell utilities for dealing the silent files
  ☆58Updated last week
• mit-ll / AlphaSeq_Antibody_Dataset
  Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide
  ☆20Updated 2 years ago
• oxpig / kasearch
  KA-Search: Rapid and exhaustive sequence identity search of known antibodies
  ☆22Updated 8 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆53Updated last month
• Kortemme-Lab / flex_ddG_tutorial
  ☆105Updated 2 years ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆62Updated 3 years ago
• Kuhlman-Lab / evopro
  ☆74Updated 3 weeks ago
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• Wangchentong / Proteus
  Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.
  ☆73Updated 9 months ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆47Updated 2 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆24Updated last year
• Fleishman-Lab / CUMAb
  ☆19Updated 9 months ago
• sarahsirin / AB-Bind-Database
  Antibody Binding Mutational Database
  ☆30Updated 5 years ago
• TencentAI4S / IgGM
  [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design
  ☆61Updated 3 weeks ago
• HBioquant / DiffBindFR
  Diffusion model based protein-ligand flexible docking method
  ☆102Updated 5 months ago
• ai4protein / Pro-FSFP
  Pro-FSFP: Few-Shot Protein Fitness Prediction
  ☆77Updated 2 months ago