Alternatives and similar repositories for PECAN

Users that are interested in PECAN are comparing it to the libraries listed below

• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆73Updated 5 years ago
• dahjan / DMS_opt
  ☆73Updated 5 years ago
• Liuxg16 / GeoPPI
  ☆87Updated 3 years ago
• jertubiana / ScanNet
  ☆133Updated 5 months ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆130Updated 3 years ago
• FTD007 / PInet
  ☆25Updated 3 years ago
• oxpig / Paragraph
  Antibody paratope prediction using Graph Neural Networks with minimal feature vectors
  ☆37Updated 2 years ago
• wengong-jin / abdockgen
  ☆107Updated 2 years ago
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆90Updated 2 months ago
• jeffreyruffolo / AntiBERTy
  Antibody-specific masked language model
  ☆63Updated 2 years ago
• oxpig / Graphinity
  Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
  ☆52Updated 4 months ago
• HBioquant / DiffBindFR
  Diffusion model based protein-ligand flexible docking method
  ☆115Updated last year
• alchemab / antiberta
  Public repository describing training and testing of AntiBERTa.
  ☆61Updated 2 years ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆71Updated 4 years ago
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆164Updated last month
• stebliankin / piston
  Evaluating Protein Binding Interfaces with Transformer Networks
  ☆46Updated 2 years ago
• LPDI-EPFL / masif-neosurf
  MaSIF-neosurf: surface-based protein design for ternary complexes.
  ☆155Updated last week
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 3 years ago
• hiranumn / DeepAccNet
  Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
  ☆90Updated 4 years ago
• idlutz / protein-backbone-MCTS
  ☆51Updated last year
• DeepGraphLearning / GearBind
  Pretrainable geometric graph neural network for antibody affinity maturation
  ☆66Updated 8 months ago
• sarahsirin / AB-Bind-Database
  Antibody Binding Mutational Database
  ☆36Updated 6 years ago
• samsledje / ConPLex_dev
  ☆53Updated last year
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆67Updated 4 months ago
• CAODH / EquiScore
  ☆79Updated last year
• MSBMI-SAFE / AbBiBench
  AbBiBench (Antibody Binding Benchmarking), a benchmarking framework for optimizing antibody binding affinity.
  ☆29Updated last month
• bytedance / Protenix-Dock
  An accurate and trainable end-to-end protein-ligand docking framework
  ☆114Updated 7 months ago
• HeliXonProtein / binding-ddg-predictor
  open source repository
  ☆143Updated last year
• LBM-EPFL / PeSTo
  Geometric deep learning method to predict protein binding interfaces from a protein structure.
  ☆148Updated 2 years ago
• wengong-jin / DSMBind
  ☆95Updated last year