Alternatives and similar repositories for bioinformatics_curriculum

Users that are interested in bioinformatics_curriculum are comparing it to the libraries listed below

• Mykrobe-tools / mykrobe
  Antibiotic resistance prediction in minutes
  ☆111Updated 9 months ago
• ToniWestbrook / paladin
  Protein Alignment and Detection Interface
  ☆61Updated last year
• husonlab / megan-ce
  MEGAN Community Edition
  ☆72Updated last year
• microgenomics / tutorials
  In this repo you will find demos and tutorials prepared by members of the CBIB. Feel free to use them for non-commercial activities given…
  ☆83Updated 7 years ago
• enasequence / enaBrowserTools
  A collection of scripts to assist in the retrieval of data from the ENA Browser
  ☆88Updated last month
• bhattlab / bhattlab_workflows
  Computational workflows for metagenomics tasks, by the Bhatt lab
  ☆47Updated 2 years ago
• bhattlab / kraken2_classification
  Snakemake workflow for metagenomic classification with Kraken2
  ☆65Updated 2 years ago
• merenlab / illumina-utils
  A library and collection of scripts to work with Illumina paired-end data (for CASAVA 1.7+ pipeline).
  ☆92Updated last year
• AstrobioMike / bit
  Bioinformatics Tools
  ☆89Updated 2 weeks ago
• jameshadfield / phandango
  an interactive viewer for populations of bacterial genomes linked by a phylogeny
  ☆127Updated last year
• HadrienG / tutorials
  Various bioinformatics tutorials
  ☆61Updated last year
• lskatz / awesome-bioinformatics-education
  resources for bioinformatics education
  ☆86Updated 4 months ago
• fhcrc / seqmagick
  An imagemagick-like frontend to Biopython SeqIO
  ☆116Updated last year
• victoriapascal / gutsmash
  gutSMASH
  ☆56Updated 8 months ago
• mourisl / Rcorrector
  Error correction for Illumina RNA-seq reads
  ☆67Updated last year
• CompSynBioLab-KoreaUniv / FunGAP
  FunGAP: fungal Genome Annotation Pipeline
  ☆111Updated 3 months ago
• hzi-bifo / traitar
  From genomes to phenotypes: Traitar, the microbial trait analyzer
  ☆60Updated 6 years ago
• alesssia / YAMP
  YAMP: Yet Another Metagenomic Pipeline
  ☆60Updated 2 years ago
• knights-lab / BURST
  An ultrafast optimal aligner for mapping large NGS data to large genome databases.
  ☆57Updated last year
• sunbeam-labs / sunbeam
  A robust, extensible metagenomics pipeline
  ☆173Updated this week
• replikation / poreCov
  SARS-CoV-2 workflow for nanopore sequence data
  ☆41Updated last month
• MVesuviusC / primerTree
  PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs
  ☆52Updated last year
• fbreitwieser / bamcov
  Quickly calculate and visualize sequence coverage in alignment files
  ☆99Updated 6 years ago
• louiejtaylor / grabseqs
  A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA
  ☆107Updated 3 weeks ago
• biocore / redbiom
  Sample search by metadata and features
  ☆47Updated 2 years ago
• bjtully / BioData
  All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")
  ☆77Updated 2 years ago
• kblin / ncbi-acc-download
  Download files from NCBI Entrez by accession
  ☆127Updated last year
• giesselmann / nanopype
  Snakemake pipelines for nanopore sequencing data archiving and processing
  ☆91Updated 3 years ago
• GenomicsAotearoa / metagenomics_summer_school
  Course materials for the Genomics Aotearoa Metagenomics Summer School, to be hosted at the University of Auckland in Septermber
  ☆63Updated last year
• ridgelab / JustOrthologs
  ☆35Updated 2 years ago