const-ae / Neural_Network_DNA_Demo

Related projects: ⓘ

• kundajelab / training_camp
  Genetics training camp
  ☆21Updated 4 years ago
• davek44 / utility
  Computational biology utility scripts
  ☆19Updated 2 months ago
• jbkinney / mavenn
  MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect
  ☆24Updated 3 months ago
• widdowquinn / Teaching-IBioIC-Intro-to-Bioinformatics
  Course materials for the IBioIC Introduction to Bioinformatics training course
  ☆10Updated 7 years ago
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆43Updated 4 years ago
• brentp / python-giggle
  python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.
  ☆16Updated 6 years ago
• loosolab / UROPA
  Universal RObust Peak Annotator
  ☆15Updated 9 months ago
• uci-cbcl / DeepCons
  Understanding sequence conservation with deep learning
  ☆19Updated 7 years ago
• etirouthier / keras_dna
  ☆22Updated 3 years ago
• jessemzhang / deep_learning_genomics_nlp
  Final project for CS224d
  ☆9Updated 7 years ago
• fomightez / sequencework
  programs and scripts, mainly python, for analyses related to nucleic or protein sequences
  ☆24Updated 3 weeks ago
• lcdb / lcdb-wf
  Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis
  ☆20Updated last week
• Guannan-Wang / GOMCL
  GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions
  ☆20Updated last year
• ueser / FIDDLE
  Flexible Integration of Data with Deep LEarning
  ☆50Updated last year
• kundajelab / dfim
  Deep Feature Interaction Maps (DFIM)
  ☆52Updated 5 years ago
• hbc / NGS-Data-Analysis-long-course
  ☆11Updated 7 years ago
• babelomics / babelomics
  ☆40Updated 6 years ago
• SBRG / Protein_ML
  Machine learning workflows for analyzing high-throughput protein data
  ☆24Updated 7 years ago
• JanZrimec / DeepExpression
  ☆33Updated last year
• Novartis / DRUG-seq
  DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline
  ☆20Updated 3 years ago
• gagneurlab / concise
  Concise: Keras extension for regulatory genomics
  ☆32Updated last year
• bioforensics / rsidx
  Library for indexing VCF files for random access searches by rsID
  ☆17Updated last year
• broadinstitute / genepy
  Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python
  ☆19Updated last year
• csoneson / NativeRNAseqComplexTranscriptome
  Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"
  ☆19Updated 4 years ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆41Updated 8 years ago
• kundajelab / coda
  Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data
  ☆33Updated 7 years ago
• aquaskyline / Skyhawk
  An Artificial Neural Network-based discriminator for validating clinically significant genomic variants
  ☆35Updated 8 months ago
• jbloomlab / alignparse
  Align sequences and then parse features.
  ☆17Updated 3 weeks ago
• kundajelab / simdna
  A python library for creating simulated regulatory DNA sequences
  ☆38Updated last year
• gregpoore / tcga_rebuttal
  Re-analysis of data provided by Gihawi et al. 2023 bioRxiv
  ☆25Updated last year
• gmcvicker / draw_genes
  A flexible python program for generating figures from regions of the genome.
  ☆13Updated 5 years ago