neilfws / utils4bioinformatics
Little code snippets that do (hopefully) useful things
β23Updated last year
Alternatives and similar repositories for utils4bioinformatics:
Users that are interested in utils4bioinformatics are comparing it to the libraries listed below
- This BLENDER has been sunsettedβ16Updated 6 months ago
- 𧬠MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotationsβ32Updated 10 months ago
- Annotating principal splice isoformsβ14Updated 6 months ago
- practical course about lab methods in genome researchβ23Updated 2 years ago
- Detect somatic variants from tumor and normal WGS/WXS dataβ15Updated last month
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functionsβ20Updated last year
- Client-side REST access to KEGGβ11Updated 2 weeks ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.β50Updated 5 years ago
- A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing dataβ12Updated last year
- β15Updated 5 years ago
- Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differentiaβ¦β13Updated last year
- DEvis: an R package for aggregation and visualization of differential expression dataβ20Updated 4 years ago
- πΊ Exploring novel tumor epitope identificationβ35Updated 4 years ago
- abi2fastq is a small utility to convert Sanger sequencing reads in .abi (applied biosystems) format to FASTQβ11Updated 7 years ago
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.β28Updated last month
- Plot stacked logos for single or multiple DNA, RNA and amino acid sequenceβ15Updated 3 months ago
- Manuscript describing ChronQC is now available online in Bioinformaticsβ18Updated 5 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequencesβ24Updated last week
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotationβ27Updated last year
- The Mouse Gastrointestinal Bacteria Catalogueβ15Updated 3 years ago
- Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.β14Updated last year
- Freelance bioinformaticians directoryβ9Updated 2 years ago
- Python CLIβ12Updated 3 weeks ago
- Open source short linear motif discovery and sequence analysisβ23Updated 6 months ago
- course about NGS data processing: genomics and transcriptomicsβ33Updated 3 years ago
- supplementary tables and filesβ10Updated last year
- showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.β30Updated 6 years ago
- PiGx SARS-CoV-2 wastewater sequencing pipelineβ18Updated last year
- deepStats: a stastitical toolbox for deeptools and genomic signalsβ34Updated 3 years ago
- β19Updated 2 years ago