amirakbarnejad / PyDmed

Related projects ⓘ

Alternatives and complementary repositories for PyDmed

• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆34Updated 10 months ago
• haranrk / DigiPathAI
  Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay
  ☆65Updated last year
• navidstuv / NuClick
  Interactive Segmentation of Nucleus
  ☆61Updated 2 years ago
• smujiang / Re-stained_WSIs_Registration
  Re-stained whole slide image alignment
  ☆31Updated last year
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆67Updated 2 years ago
• choosehappy / QuickAnnotator
  An open-source digital pathology based rapid image annotation tool
  ☆74Updated this week
• aetherAI / whole-slide-cnn
  This repository provides scripts to reproduce the results in the paper "An annotation-free whole-slide training approach to pathological …
  ☆62Updated 3 years ago
• EIDOSLAB / torchstain
  Stain normalization tools for histological analysis and computational pathology
  ☆118Updated 7 months ago
• secrierlab / HistoMIL
  A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.
  ☆27Updated 6 months ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆46Updated 2 years ago
• kevindehaan / stain-transformation
  ☆40Updated 2 years ago
• wenqi006 / SlideGraph
  ☆49Updated 2 years ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆52Updated last year
• m4ln / stainTransfer_CycleGAN_pytorch
  Image-to-Image Translation in PyTorch
  ☆23Updated last year
• masih4 / DigiPathoImageAnalysis
  List of academic institutes/companies working on computer-based digital pathology image analysis
  ☆37Updated 2 weeks ago
• wanghao14 / Stain_Normalization
  Some stain normalization code
  ☆85Updated 2 years ago
• DIAGNijmegen / pathology-streaming-pipeline
  Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.
  ☆75Updated last year
• lyndonchan / hsn_v1
  HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)
  ☆87Updated 4 years ago
• paip-2019 / challenge
  ☆30Updated 4 years ago
• markowetzlab / pathml
  A Python library for deep learning on whole-slide images
  ☆50Updated 3 years ago
• KatherLab / HIA
  Histopathology Image Analysis
  ☆91Updated last year
• MEDAL-IITB / Fast_WSI_Color_Norm
  Codes for Fast GPU-Enabled Color Normalization of Whole Slide Images in Digital Pathology
  ☆75Updated 4 years ago
• DIAGNijmegen / pathology-artifact-detection
  Quality control of whole-slide images through multi-class semantic segmentation of artifacts
  ☆28Updated 9 months ago
• smujiang / WSIPenMarkingRemoval
  Remove pen-marking annotations on whole slide images(WSIs) for data achiving.
  ☆17Updated 2 years ago
• SBU-BMI / quip_cnn_segmentation
  CNN based segmentation codes
  ☆47Updated last year
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆47Updated 2 months ago
• andreped / fast-stain-normalization
  GPU-accelerated stain normalization command line tool
  ☆19Updated last year
• sophiajw / HistAuGAN
  ☆43Updated 2 years ago
• zhaoxuanma / Deeplearning-digital-pathology
  Full package for applying deep learning to virtual slides.
  ☆67Updated 6 years ago
• andreped / NoCodeSeg
  🔬 Code-free deep segmentation for computational pathology
  ☆52Updated 5 months ago