Minys233 / Dynaformer
☆31Updated 9 months ago
Alternatives and similar repositories for Dynaformer:
Users that are interested in Dynaformer are comparing it to the libraries listed below
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆32Updated 5 months ago
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆27Updated last year
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆45Updated 2 months ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆40Updated 4 months ago
- Benchmarking code accompanying the release of `bioemu`☆20Updated last week
- ☆34Updated 6 months ago
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆20Updated 8 months ago
- Autoregressive fragment-based diffusion for target-aware ligand design☆28Updated 10 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆33Updated 10 months ago
- ☆31Updated 4 months ago
- ☆31Updated last year
- ☆22Updated 3 months ago
- ☆48Updated 3 months ago
- This repository implements Gibbs sampling with Graph-based Smoothing☆38Updated 10 months ago
- Fast and accurate molecular docking with an AI pose scoring function☆37Updated last year
- Code for "A Deep Learning Framework for Flexible Docking and Design"☆16Updated 2 years ago
- ☆23Updated 10 months ago
- Kinase–drug binding prediction with calibrated uncertainty quantification☆23Updated last year
- protein structure generation with sparse all-atom denoising models☆30Updated 2 months ago
- Fragment-based Molecular Expansion☆20Updated last year
- ☆12Updated 3 months ago
- InteractionGraphNet: a Novel and Efficient Deep Graph Representation Learning Framework for Accurate Protein-Ligand Interaction Predictio…☆30Updated 3 years ago
- ☆27Updated 4 months ago
- Multi-Scale Representation Learning on Proteins (NeurIPS 2021)☆47Updated last year
- ☆32Updated 9 months ago
- Codebase of paper "Structure Language Models for Protein Conformation Generation" (ICLR'25)☆49Updated last month
- ☆11Updated 4 months ago
- Scoring methods for predicting the DDG upon protein mutation☆14Updated 2 years ago
- 3D equivariant graph transformer for all-atom refinement of protein tertiary structures☆25Updated last year
- IDPFold test version☆19Updated 7 months ago