celinescornavacca / ecceTERALinks
☆13Updated last month
Alternatives and similar repositories for ecceTERA
Users that are interested in ecceTERA are comparing it to the libraries listed below
Sorting:
- ☆76Updated 7 months ago
- Analyzer of Gene and Species Trees☆10Updated 9 years ago
- Workflow to detect and phase hybrids in target capture data☆20Updated 2 years ago
- Bayesian analysis of genomic sequence data under the multispecies coalescent model☆111Updated this week
- Alignment-based retrieval and concatenation of phylogenetic markers from whole genome sequence (WGS) data☆36Updated last year
- a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies☆79Updated 3 months ago
- Resources for Brown University's BIOL 1435 course.☆22Updated last year
- starfish: a modular toolkit for giant mobile element annotation☆34Updated last year
- Bifrost graph gene caller.☆97Updated 3 months ago
- Drawing reconciled phylogenetic trees allowing 1, 2 or 3 reconcillation levels☆23Updated 2 months ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆90Updated last year
- Detecting multi-genome synteny using minimizer graph mapping☆96Updated this week
- Alignment-Based Sequence extraction☆15Updated 3 years ago
- post processing of bacterial pangenome gene presence/absence matrices☆63Updated 10 months ago
- Recovering genes from targeted sequence capture data☆130Updated 6 months ago
- Small utility script to submit genomes to PHASTER for phage detection☆24Updated 4 years ago
- PhyloFisher is a software package written in Python3 that can be used for the creation, analysis, and visualization of phylogenomic datas…☆34Updated last month
- A bioinformatic toolkit to align genome assemblies into pangenome graphs☆117Updated last month
- Reorients assembled microbial sequences☆131Updated 4 months ago
- Concatenates FASTA formatted files to one "phyml" (PHYLIP) formatted file☆74Updated last year
- Split k-mer analysis – version 2☆103Updated 3 weeks ago
- Bayesian inference of ancestral dates on bacterial phylogenetic trees☆93Updated last month
- A toolkit for analyzing and visualizing phylogenetic placement data☆62Updated 2 months ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆51Updated last year
- shell tools for processing phylogenetic trees☆117Updated 3 years ago
- ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes☆118Updated last year
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆76Updated 8 months ago
- Topology weighting by iterative sampling of sub-trees☆82Updated last year
- A phylogeny dating method using least-squares algorithms and criteria☆32Updated last year
- BEAV: Bacterial Element Annotation reVamped☆73Updated 4 months ago