celinescornavacca / ecceTERA
☆11Updated 3 years ago
Related projects: ⓘ
- A phylogeny dating method using least-squares algorithms and criteria☆24Updated last year
- An R function to compute Concordance Factors from SNP datasets☆13Updated last year
- Workflow to detect and phase hybrids in target capture data☆15Updated last year
- A toolkit for analyzing and visualizing phylogenetic (placement) data☆56Updated 2 months ago
- Analyzer of Gene and Species Trees☆10Updated 8 years ago
- ☆65Updated 8 months ago
- ☆37Updated last year
- The integrated Sequentially Markovian Coalescent☆10Updated 5 months ago
- ☆25Updated 3 years ago
- This repository contains the code and manual for the R package delimitR.☆16Updated 2 years ago
- Resources for Brown University's BIOL 1435 course.☆20Updated 4 months ago
- HybSeq Target Capture of 353 Protein Coding Genes in Any Angiosperm☆16Updated last year
- Quantifying Introgression via Branch Lengths☆49Updated last year
- spruceup☆19Updated last month
- post processing of bacterial pangenome gene presence/absence matrices☆50Updated 3 weeks ago
- a pipeline for reconciliation of phylogenetic histories within a bacterial pangenome☆46Updated last year
- starfish: a modular toolkit for giant mobile element annotation☆26Updated last month
- Bayesian analysis of genomic sequence data under the multispecies coalescent model☆87Updated 2 weeks ago
- ☆21Updated 5 years ago
- Bayesian inference of ancestral dates on bacterial phylogenetic trees☆81Updated 3 months ago
- All scripts used for the analysis of the twilight of the pan-genome, and scripts available for others to apply similar analysis☆13Updated 3 years ago
- Alignment-Based Sequence extraction☆13Updated 2 years ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆41Updated 6 months ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆32Updated last year
- A tool to infer species tree and phylogenetic network from multilocus data☆32Updated 4 years ago
- A tool to identify and annotate homoplasies on a phylogeny and sequence alignment☆19Updated 3 years ago
- Small utility script to submit genomes to PHASTER for phage detection☆22Updated 2 years ago
- ☆25Updated last year
- Metagenomic Analysis in Real Time☆17Updated last month
- Interim data for the Darwin Tree of Life Project☆32Updated 4 years ago