ImmuneApp for HLA-I epitope prediction and immunopeptidome analysis
☆14Sep 21, 2024Updated last year
Alternatives and similar repositories for ImmuneApp
Users that are interested in ImmuneApp are comparing it to the libraries listed below
Sorting:
- HLA-I ligand predictor☆43Sep 24, 2025Updated 5 months ago
- ☆11Jan 15, 2020Updated 6 years ago
- Frankies Scalable, AI-Based Antibody Design Pipeline☆18Feb 20, 2026Updated last week
- A unified cross-attention model for predicting antigen binding specificity to both HLA and TCR molecules☆11Jul 9, 2025Updated 7 months ago
- EvolveX, a de novo antibody computational design pipeline.☆22Sep 18, 2025Updated 5 months ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆60Dec 17, 2025Updated 2 months ago
- Rank binders by structure modeling☆16Mar 10, 2025Updated 11 months ago
- JAX translation of boltz☆23Aug 4, 2025Updated 6 months ago
- Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning☆23Mar 19, 2025Updated 11 months ago
- ☆21Oct 26, 2024Updated last year
- PRedictor of IMmunogenic Epitopes☆27Sep 24, 2025Updated 5 months ago
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆34Jan 27, 2026Updated last month
- Predict mutated T-cell epitopes from sequencing data☆30Feb 18, 2025Updated last year
- ☆70Jan 23, 2026Updated last month
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆50Dec 2, 2025Updated 3 months ago
- ☆37Aug 28, 2023Updated 2 years ago
- A Python package for amino acid sequence analysis. Proforma 2.1 complicant.☆14Feb 6, 2026Updated 3 weeks ago
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆42Dec 26, 2024Updated last year
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆38Nov 14, 2021Updated 4 years ago
- nanobody melting temperature prediction using protein embeddings☆11Feb 24, 2025Updated last year
- Performs BLAST on compressed proteomic data.☆17Jun 15, 2015Updated 10 years ago
- Software used by Trinity CTAT for building CTAT Genome Libs, resource databases shared by Trinity CTAT components☆10Apr 28, 2025Updated 10 months ago
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆11Updated this week
- Open Source, Prepare a molecular dynamic simulation from scratch without installing local VMD, use LigParGen for topology, it is one of t…☆13Jul 3, 2023Updated 2 years ago
- ☆11Jun 16, 2024Updated last year
- ☆14Oct 5, 2024Updated last year
- Disordered protein ensemble prediction☆12Feb 19, 2026Updated last week
- Scalable genomic analysis pipelines, written in WDL☆11Updated this week
- A makeshift python program which relies on nltk and Stanford Core NLP models to expand common contractions in the english language.☆10Nov 8, 2017Updated 8 years ago
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆11Jul 8, 2021Updated 4 years ago
- ☆11May 11, 2024Updated last year
- A tutorial for Streamlined Alchemical Free Energy Perturbations with NAMD☆15Mar 20, 2025Updated 11 months ago
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- mBER - Manifold Binder Engineering and Refinement. mBER enables antibody binder design by leveraging structure templates and sequence con…☆106Jan 9, 2026Updated last month
- Code of "Instruction Multi-Constraint Molecular Generation Using a Teacher-Student Large Language Model"☆14Jul 8, 2025Updated 7 months ago
- ☆12Mar 9, 2025Updated 11 months ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆13Jul 9, 2025Updated 7 months ago
- ☆21Jul 8, 2025Updated 7 months ago
- Antigen-receptor Design Against Peptide-MHC Targets☆20Jan 9, 2026Updated last month