BurntSushi / cablastp
Performs BLAST on compressed proteomic data.
☆15Updated 9 years ago
Related projects: ⓘ
- Compute cluster (HPC) job submission library for Go (#golang) based on the open DRMAA standard.☆48Updated 2 months ago
- Yet Another CWL Engine by Golang☆18Updated 5 years ago
- Go implementation of ntHash☆20Updated 3 years ago
- Histosketching Using Little Kmers☆55Updated last year
- CWL (and input file) parser for Golang, used by github.com/otiai10/yacle☆22Updated 5 years ago
- Home of the Genomic Feature and Variation Ontology (GFVO)☆16Updated 3 years ago
- ☆34Updated last year
- deBGR: An Efficient and Near-Exact Representation of the Weighted de Bruijn Graph☆30Updated 3 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 4 years ago
- Write-once-read-many table for large datasets.☆28Updated 11 months ago
- Python client for GA4GH htsget protocol☆15Updated last year
- ALPACA is a caller for genomic variants (single nucleotide and small indels) from next-generation sequencing data that uses a novel algeb…☆24Updated 4 years ago
- deploy a snakemake pipeline directly from version control (under development)☆19Updated 4 months ago
- Build and Deliver Software with Containers☆32Updated 3 years ago
- A fast and space-efficient pre-filter for estimating the quantification of very large collections of nucleotide sequences☆13Updated last year
- succinct labeled graphs with collections and paths☆15Updated 5 years ago
- SQL-like query language for the SAM/BAM file format☆26Updated last year
- a simple read-only sequence database, designed for short reads☆62Updated 7 months ago
- Feature Annotation Location Description Ontology☆34Updated 4 years ago
- Ansible Playbook for usegalaxy.org☆30Updated this week
- Python and Rust library for loading, saving, and manipulating taxonomic trees☆35Updated 4 months ago
- Library for graph-like storage in postgresql using sqlalchemy☆21Updated 2 weeks ago
- base documentation site for Singularity software☆27Updated 2 years ago
- The SnoVault general purpose hybrid object-relational database☆16Updated 6 months ago
- Distributed job execution application built for Galaxy☆37Updated last month
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆26Updated 2 months ago
- Bioconda is a distribution of bioinformatics software realized as a channel for the versatile package manager Conda.☆37Updated this week
- Project Manager for NGS data analysis☆25Updated 2 years ago
- Bonsai: Fast, flexible taxonomic analysis and classification☆70Updated 5 months ago
- example applications built using bíogo☆18Updated 3 years ago