A high performance drop-in replacement for Biotite's PDBFile.
☆43May 27, 2025Updated last year
Alternatives and similar repositories for fastpdb
Users that are interested in fastpdb are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A bridge between Biotite and OpenMM☆15Mar 16, 2025Updated last year
- Visualize structure data from Biotite with PyMOL☆26Mar 16, 2025Updated last year
- Generated color schemes for sequence alignment visualizations☆18Jul 20, 2022Updated 3 years ago
- Adding hydrogens to molecular models☆62Nov 24, 2025Updated 6 months ago
- Display PackedPose objects, Pose objects, or PDB files within a Jupyter notebook and Google Colab☆11Oct 16, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- PINDER: The Protein INteraction Dataset and Evaluation Resource☆156Nov 15, 2024Updated last year
- Metrics for our protein design competitions.☆35Nov 1, 2024Updated last year
- Clusters protein chains based on CA distance difference☆18Updated this week
- Code, intermediate results and an interactive visualisation on prediction of putative novel enzymes and small molecule binding proteins p…☆28Aug 9, 2023Updated 2 years ago
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆104Jun 9, 2025Updated last year
- Metrics to evaluate distributional coverage of generative models of protein structures.☆21Aug 13, 2025Updated 9 months ago
- Tutorial files☆12Aug 7, 2024Updated last year
- Semantic Segmentor for Protein Structures.☆11Dec 20, 2021Updated 4 years ago
- Fast indexing and search of discontinuous motifs in protein structures☆144Apr 23, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆18Aug 28, 2025Updated 9 months ago
- It's a package for evaluation of predicted poses, right?☆77Mar 27, 2026Updated 2 months ago
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆14Updated this week
- TMol☆75Jun 3, 2026Updated last week
- ☆16Jun 11, 2021Updated 4 years ago
- A comprehensive library for computational molecular biology☆956May 27, 2026Updated last week
- A Python platform for Structural Bioinformatics☆58Mar 18, 2025Updated last year
- Docking Tool Benchmarking Workflow☆25Jul 17, 2024Updated last year
- Files and utilities for protein-emoji☆27Nov 4, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A bunch of shell utilities for dealing the silent files☆81Apr 6, 2026Updated 2 months ago
- Ligand binding site prediction and virtual screening☆12Oct 26, 2018Updated 7 years ago
- Some scripts that I keep using over and over.☆21Jul 5, 2025Updated 11 months ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆36Jul 28, 2022Updated 3 years ago
- Terminal viewer for pdb files☆22Jan 5, 2026Updated 5 months ago
- ☆581Feb 6, 2025Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆64May 21, 2025Updated last year
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆18Feb 8, 2024Updated 2 years ago
- ☆24Nov 14, 2025Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆23Jul 1, 2020Updated 5 years ago
- random colab notebooks for biology☆26Aug 23, 2025Updated 9 months ago
- Analysis and design of protein-protein or protein-peptide interactions based on atlas database.☆15Sep 27, 2022Updated 3 years ago
- A generic mechanism for describing views used in molecular visualizations☆66Mar 1, 2026Updated 3 months ago
- A Rust implementation of the LightDock macromolecular docking software☆30Apr 19, 2024Updated 2 years ago
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆279Feb 14, 2024Updated 2 years ago
- Protein Ligand INteraction Dataset and Evaluation Resource☆292May 28, 2026Updated last week