bioinformatics-core-shared-training / cruk-autumn-school-2017Links
CRUK Bioinformatics Workshop September 2017
☆18Updated 8 years ago
Alternatives and similar repositories for cruk-autumn-school-2017
Users that are interested in cruk-autumn-school-2017 are comparing it to the libraries listed below
Sorting:
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- microRNA profiling pipeline☆79Updated 3 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆71Updated 9 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆93Updated 8 years ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆74Updated 2 years ago
- ☆119Updated 2 years ago
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- DCC/DAC methylation pipeline source☆57Updated 5 years ago
- A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.☆103Updated 2 years ago
- Tutorial Website☆59Updated 4 years ago
- ☆55Updated last week
- A computational workflow for exitron splicing identification☆12Updated last year
- RNA-seq Quantification of Alternative Polyadenylation☆47Updated 2 months ago
- tools to find circRNAs in RNA-seq data☆44Updated 7 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆60Updated 5 years ago
- Reference data: BED files, genes, transcripts, variations.☆85Updated 7 years ago
- Analysis pipeline for ATAC-seq Data☆62Updated 4 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆82Updated 8 months ago
- Tutorial for AMSI BioInfoSummer 2018☆30Updated 6 years ago
- RNA-seq data analysis practical☆60Updated 11 years ago
- STAR based ENCODE Long RNA-Seq processing pipeline☆95Updated 4 years ago
- A pipeline and a framework for NGS analysis (RNA-seq and scRNA-seq)☆54Updated 3 months ago
- HMMRATAC peak caller for ATAC-seq data☆99Updated 10 months ago
- a snakemake pipeline to process ChIP-seq files from GEO or in-house☆110Updated 5 years ago
- deconstructSigs☆143Updated 2 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- This repo has been archived, these workflows are still available in the GATK repository under the scripts directory. The workflows are al…☆77Updated 5 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆59Updated 2 weeks ago