bioinformatics-core-shared-training / cruk-autumn-school-2017Links
CRUK Bioinformatics Workshop September 2017
☆18Updated 8 years ago
Alternatives and similar repositories for cruk-autumn-school-2017
Users that are interested in cruk-autumn-school-2017 are comparing it to the libraries listed below
Sorting:
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- Tutorial for AMSI BioInfoSummer 2018☆30Updated 7 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆72Updated 11 months ago
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆32Updated 6 years ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated 2 years ago
- Analysis pipeline for ATAC-seq Data☆62Updated 4 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆61Updated 2 months ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 4 years ago
- Tutorial Website☆60Updated 4 years ago
- ☆120Updated 2 years ago
- microRNA profiling pipeline☆79Updated 3 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆83Updated 10 months ago
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- ☆33Updated 7 years ago
- Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).☆54Updated 4 years ago
- Links to ATAC-seq analysis tools☆73Updated 4 years ago
- RNA-seq Quantification of Alternative Polyadenylation☆50Updated 5 months ago
- A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.☆104Updated 3 years ago
- HMMRATAC peak caller for ATAC-seq data☆99Updated last year
- From RNA-seq raw reads to enriched pathways by DEGs☆33Updated last year
- nextNEOpi: a comprehensive pipeline for computational neoantigen prediction☆81Updated 6 months ago
- STAR based ENCODE Long RNA-Seq processing pipeline☆96Updated 4 years ago
- ☆56Updated last month
- A computational workflow for exitron splicing identification☆12Updated last year
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆94Updated 8 years ago
- a snakemake pipeline to process ChIP-seq files from GEO or in-house☆110Updated 5 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆67Updated 5 years ago
- tools to find circRNAs in RNA-seq data☆44Updated 8 years ago
- ☆32Updated 7 years ago