agneantanaviciute / colonicepitheliumLinks
☆12Updated 6 years ago
Alternatives and similar repositories for colonicepithelium
Users that are interested in colonicepithelium are comparing it to the libraries listed below
Sorting:
- A tool for removing doublets from single-cell RNA-seq data☆74Updated 4 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆45Updated last year
- ☆47Updated 5 months ago
- Scripts for processing single liver cells RNA-Seq 10X Genomics Data☆24Updated 6 years ago
- Enrichment Networks for Pathway Enrichment Analysis☆53Updated 2 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- scWGCNA☆60Updated 2 years ago
- Single cell RNA-seq analysis bundle☆34Updated 5 years ago
- Clone of the Bioconductor repository for the DropletUtils package.☆59Updated last week
- R package for robust clustering of single cell RNA sequencing data☆39Updated last year
- ☆38Updated 2 years ago
- ☆55Updated 4 years ago
- Toolbox with R scripts☆38Updated 6 years ago
- This resource provides the code developed in the study of Jerby-Arnon _et al. "Single-cell RNA-seq of melanoma ecosystems reveals sources…☆71Updated 6 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 4 years ago
- ☆61Updated 5 years ago
- R code for single-cell analysis of intestinal epithelial cells☆22Updated 7 years ago
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆38Updated 3 years ago
- Algorithm for the inference of cell types and lineage trees from single-cell RNA-seq data. Please download the R package from the RaceID3…☆15Updated 6 years ago
- ☆49Updated 5 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆37Updated 2 years ago
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Updated 2 years ago
- scGSVA: Perform GSVA for single cell RNA seq☆61Updated 6 months ago
- The following code accompanies a manuscript combining single-cell RNA-sequencing and genotyping to analyze cellular hierarchies in acute …☆37Updated 5 years ago
- ☆62Updated 4 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated last month
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆47Updated 10 months ago
- Single cell transcriptomics reveals cerebrospinal fluid immune dysregulation during healthy brain aging and cognitive impairment☆27Updated 2 years ago
- Bioconductor package esATAC: an Easy-to-use Systematic pipeline for ATAC-seq data analysis☆23Updated 2 years ago