Nano Prot GPT: NanoGPT on protein sequences
☆20Mar 10, 2023Updated 3 years ago
Alternatives and similar repositories for prot-gpt
Users that are interested in prot-gpt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DyNoPy☆11Sep 5, 2024Updated last year
- ☆48Jan 27, 2026Updated 4 months ago
- Generative Pretrained Autoregressive Transformer Graph Neural Network applied to the Analysis and Discovery of Materials☆16Aug 9, 2023Updated 2 years ago
- ☆22Nov 6, 2024Updated last year
- Demo of diffusion models #DDPM applied to molecular dynamics of small peptide☆14Jan 26, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- RNA sequence design for a target protein sequence☆13Jun 2, 2026Updated 2 weeks ago
- Code for humanization of antibody and nanobody☆86Aug 28, 2025Updated 9 months ago
- ☆11Jun 12, 2026Updated last week
- Software for the prediction of FRET data from conformational ensembles.☆24Dec 19, 2024Updated last year
- de novo design of high affinity biological binders☆176Jun 2, 2026Updated 2 weeks ago
- ☆24May 19, 2025Updated last year
- CRISPR, faster, better – The Crackling method for whole-genome target detection☆11Jan 11, 2024Updated 2 years ago
- Antibody-Specific Epitope Mapping☆18Sep 10, 2025Updated 9 months ago
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆38Dec 12, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bib'23: Improved the Heterodimer Protein Complex Prediction with Protein Language Models☆15Dec 21, 2023Updated 2 years ago
- FrameDiPT: an SE(3) diffusion model for protein structure inpainting☆60Apr 13, 2026Updated 2 months ago
- CLIP-based model for aligning epitopes to immune receptors☆11Apr 30, 2025Updated last year
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆34Jun 9, 2024Updated 2 years ago
- PLM-interact: extending protein language models to predict protein-protein interactions.☆71Aug 29, 2025Updated 9 months ago
- ☆11Jun 16, 2024Updated 2 years ago
- Metrics for our protein design competitions.☆35Nov 1, 2024Updated last year
- Robust estimations from distribution structures: Mean.☆18Mar 29, 2024Updated 2 years ago
- Robust estimations from distribution structures: Invariant moments.☆18Mar 29, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Coming Soon...☆10Mar 14, 2022Updated 4 years ago
- InterLabelGO+: Unraveling label correlations in protein function prediction☆16Aug 5, 2025Updated 10 months ago
- Simulation code for the prediction of RNA structures.☆14Jan 21, 2025Updated last year
- Alchemical mutation scoring map☆10May 19, 2024Updated 2 years ago
- ☆12Nov 16, 2023Updated 2 years ago
- ☆27Feb 10, 2024Updated 2 years ago
- Code for Pre-training Protein Encoder via Siamese Sequence-Structure Diffusion Trajectory Prediction (https://arxiv.org/abs/2301.12068)☆41Jul 9, 2023Updated 2 years ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆54Updated this week
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆43May 15, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Official implementation of NeurIPS'24 paper "Bridge-IF: Learning Inverse Protein Folding with Markov Bridges"☆18Mar 16, 2025Updated last year
- A deep learning-based predictor of enzyme optimal pH☆10Jun 25, 2025Updated 11 months ago
- ESMDynamic repo☆24Apr 28, 2026Updated last month
- Sire Molecular Simulations Framework☆67May 29, 2026Updated 2 weeks ago
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆55Dec 9, 2025Updated 6 months ago
- Interface-aware molecular generative framework for protein-protein interaction modulators☆20Dec 22, 2024Updated last year
- Code for NeurIPS 2023 paper "AVIDa-hIL6: A Large-Scale VHH Dataset Produced from an Immunized Alpaca for Predicting Antigen-Antibody Inte…☆21Nov 19, 2024Updated last year