☆16Jul 9, 2024Updated 2 years ago
Alternatives and similar repositories for RMSF-net
Users that are interested in RMSF-net are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- DeepMainmast☆15Jun 18, 2026Updated last month
- EM-GAN is a computational tool, which enables capturing protein structure information from cryo-EM maps more effectively than raw maps. I…☆18Mar 4, 2025Updated last year
- A unified cross-attention model for predicting antigen binding specificity to both HLA and TCR molecules☆15May 29, 2026Updated 2 months ago
- The GB99dms implicit solvent force field for proteins, plus scripts and data☆27Sep 19, 2025Updated 10 months ago
- ☆23Sep 19, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- The programs for preprocessing cryo-EM density maps for machine learning☆35Oct 1, 2024Updated last year
- Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks☆10Jun 13, 2022Updated 4 years ago
- From cryo-EM density map to atomic structure☆31Aug 17, 2025Updated 11 months ago
- [Neurips 2025] Official Implementation of ConfRover models☆29Feb 3, 2026Updated 6 months ago
- SableBind is an open-source framework dedicated to predicting protein-ligand binding affinity☆13Feb 6, 2025Updated last year
- CLIP-based model for aligning epitopes to immune receptors☆11Apr 30, 2025Updated last year
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆16Apr 16, 2025Updated last year
- MCGLPPI and MCGLPPI++: Integration of molecular coarse-grained model into geometric representation learning framework for protein-protein…☆25Jan 8, 2025Updated last year
- DyNoPy☆11Sep 5, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- CryoREAD: a computational tool using deep learning to automatically build full DNA/RNA atomic structure from cryo-EM map.☆33Oct 14, 2024Updated last year
- The code for UniPMT☆21Mar 16, 2025Updated last year
- Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data☆11Sep 3, 2025Updated 11 months ago
- A manually curated lists of software, publications and other resources related to the analysis of HDX-MS data.☆12Dec 15, 2025Updated 7 months ago
- ESMDynamic repo☆25Jun 26, 2026Updated last month
- Codebase of the paper "Aligning Protein Conformation Ensemble Generation with Physical Feedback" (ICML 2025)☆18Jul 6, 2025Updated last year
- cryoID identifies the protein(s) in unknown near-atomic resolution cryoEM density maps from a pool of candidate proteins.☆13Dec 1, 2019Updated 6 years ago
- Official implementation for BioKinema☆26Jun 26, 2026Updated last month
- The SIRM-RELION is designed to mitigate the preferred-orientation induced map distortion.☆17Aug 19, 2025Updated 11 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An efficient protein structural alignment search algorithm☆17Sep 17, 2025Updated 10 months ago
- Half-synthetic cryoEM micrograph generator that projects pdbs>mrcs onto existing buffer cryoEM micrographs☆19Oct 25, 2024Updated last year
- ☆77Feb 11, 2025Updated last year
- cryolo documentation☆13Mar 5, 2026Updated 5 months ago
- pdbx is a parser module in python for structures of the protein data bank in the mmcif format☆31Aug 9, 2024Updated 2 years ago
- A deep manifold learning framework for 4D cryo-EM data processing for simultaneous determination of high-resolution structures and dynami…☆19Sep 12, 2022Updated 3 years ago
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆24Oct 31, 2025Updated 9 months ago
- A high performance drop-in replacement for Biotite's PDBFile.☆43Jun 21, 2026Updated last month
- ☆15Oct 28, 2025Updated 9 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Sequence-based prediction of peptide-TCR interactions using paired chain data☆15Feb 2, 2026Updated 6 months ago
- Code fo ICLR2025 paper "A Simple yet Effective DDG Predictor is An Unsupervised Antibody Optimizer and Explainer"☆24Jul 18, 2025Updated last year
- Supernova's MM-PBSA binding free energy calculation tool.☆13Jul 13, 2026Updated last month
- in situ PSF retrieval for whole cells and tissues☆11Jul 24, 2021Updated 5 years ago
- Official repo of "CarsiDock: a deep learning paradigm for accurate protein–ligand docking and screening based on large-scale pre-training…☆119Aug 13, 2025Updated last year
- pLink is a software dedicated for the analysis of chemically cross-linked proteins or protein complexes using mass spectrometry.☆25Jan 11, 2025Updated last year
- Hierarchical Deep Multiple Instance Learning☆13Jun 30, 2023Updated 3 years ago