Alternatives and similar repositories for pytrackmate

Users that are interested in pytrackmate are comparing it to the libraries listed below

• apeer-micro / apeer-ometiff-library
  Easily read and write ome-tiff images in python
  ☆28Updated last year
• lowe-lab-ucl / arboretum
  Track and lineage visualization with btrack and Napari
  ☆45Updated 2 months ago
• tlambert03 / ome-types
  native Python dataclasses for the OME data model
  ☆65Updated this week
• lukasz-migas / napari-plot
  1d plotting in napari-based canvas.
  ☆25Updated last week
• hanjinliu / impy
  Speed up coding/extending image analysis in Python.
  ☆35Updated last week
• napari-threedee / napari-threedee
  A 3D interactivity toolbox for napari
  ☆37Updated 5 months ago
• pyapp-kit / ndv
  Simple, fast-loading, n-dimensional array viewer with minimal dependencies.
  ☆87Updated this week
• ome / napari-ome-zarr
  A napari plugin for zarr backed OME-NGFF images
  ☆42Updated last week
• m-albert / MVRegFus
  Python module for registering and fusing multi-view microscopy data
  ☆24Updated 9 months ago
• guiwitz / napari_demo
  ☆23Updated 4 years ago
• COBA-NIH / MicroscopyForBeginnersReferenceGuide
  A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation
  ☆29Updated last month
• yfukai / laptrack
  Particle tracking by solving linear assignment problem.
  ☆61Updated 2 weeks ago
• haesleinhuepf / the-segmentation-game
  Gamified image segmentation quality estimation
  ☆19Updated 7 months ago
• flevet / SR-Tesseler
  ☆13Updated 5 years ago
• transformify-plugins / segmentify
  Python image segmentation plugin
  ☆31Updated 4 years ago
• rosalindfranklininstitute / RedLionfish
  ☆36Updated last year
• BiAPoL / napari-clusters-plotter
  A napari plugin for clustering objects according to their properties.
  ☆87Updated this week
• fractal-analytics-platform / fractal-tasks-core
  Main tasks for the Fractal analytics platform
  ☆22Updated last week
• tlambert03 / imarispy
  Python package for writing 5D numpy arrays to HDF5 files readable by both Imaris and BigDataViewer
  ☆12Updated 4 years ago
• tlambert03 / napari-ndtiffs
  A napari plugin to load & deskew folders of lattice light sheet TIFFs
  ☆13Updated 2 weeks ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆71Updated 2 weeks ago
• haesleinhuepf / napari-process-points-and-surfaces
  Process and analyze surfaces using vedo in napari.
  ☆25Updated last year
• 4DNucleome / PartSeg
  Tool for segmentation in bioimaging
  ☆35Updated last week
• imjoy-team / kaibu
  Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.
  ☆35Updated 8 months ago
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆23Updated 5 years ago
• imaris / ImarisWriter
  ☆38Updated last year
• allen-cell-animated / agave
  High quality visualization for volumetric image data
  ☆53Updated this week
• morphometrics / morphometrics
  ☆22Updated 2 years ago
• chanzuckerberg / napari-hub
  Discover, install, and share napari plugins
  ☆54Updated this week
• guiwitz / microfilm
  Creating figures and animations for multi-channel images with a focus on microscopy.
  ☆78Updated last year