aayush-shah14 / PeptideGPTView external linksLinks
☆14Nov 20, 2024Updated last year
Alternatives and similar repositories for PeptideGPT
Users that are interested in PeptideGPT are comparing it to the libraries listed below
Sorting:
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆30Jul 4, 2024Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- A Novel Approach for Protein Sequence Design Based on Secondary Strucure☆24Mar 7, 2025Updated 11 months ago
- ☆33Jan 26, 2026Updated 3 weeks ago
- Rapid construction of chemical pipelines in interactive notebooks and cli usage☆13Sep 27, 2024Updated last year
- SE(3) diffusion models for generating CDR loops☆10Feb 6, 2024Updated 2 years ago
- ☆36Dec 7, 2025Updated 2 months ago
- Implementation of CycPeptMP, an accurate and efficient model for predicting the membrane permeability of cyclic peptides☆28May 10, 2025Updated 9 months ago
- Bi-Encoder approach for large-scale protein-peptide binding search☆12Jun 14, 2024Updated last year
- Peptide Virtual Screening Pipeline☆12Jul 3, 2019Updated 6 years ago
- ☆29Sep 24, 2025Updated 4 months ago
- An open-source automated peptide synthesizer based on Arduino and Python☆13Dec 19, 2025Updated last month
- Cyclic-peptide - protein complexes benchmark and associated scripts and data☆14Aug 31, 2024Updated last year
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆115Oct 30, 2025Updated 3 months ago
- ☆61Jan 23, 2026Updated 3 weeks ago
- Modelling of Large Protein Complexes☆39Aug 8, 2025Updated 6 months ago
- Accelerating Metadynamics-Based Free-Energy Calculations with Adaptive Machine Learning Potentials☆17Jun 9, 2021Updated 4 years ago
- An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders☆17Sep 10, 2024Updated last year
- ☆47Mar 26, 2025Updated 10 months ago
- Collection of tools to calculate properties of natural or synthetic peptides and proteins.☆55Feb 10, 2026Updated last week
- Multi_CycGT: A DL-Based Multimodal Model for Membrane Permeability Prediction of Cyclic Peptides☆19Dec 24, 2024Updated last year
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆47Nov 27, 2025Updated 2 months ago
- Transformer Based Language Model for Peptide Property Prediction☆49Aug 2, 2024Updated last year
- ☆27Oct 27, 2021Updated 4 years ago
- This repository contains code for the paper: "Tertiary motifs as building blocks for the design of protein-binding peptides"☆21Jan 15, 2024Updated 2 years ago
- A sequence-based pan model for peptide-MHC II binding affinity prediction.☆21May 16, 2022Updated 3 years ago
- Deep learning tools for peptide substrate prediction and generation☆36Nov 20, 2025Updated 2 months ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆60Feb 2, 2026Updated 2 weeks ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆27Jul 7, 2023Updated 2 years ago
- my own studied materials and scripts☆59Jan 20, 2026Updated 3 weeks ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆117Oct 24, 2025Updated 3 months ago
- ☆32Mar 18, 2025Updated 10 months ago
- Neural network model for prediction of amino-acid sequence from a protein backbone structure☆25Mar 5, 2025Updated 11 months ago
- A deep learning model to predict anticancer peptides.☆24Jul 10, 2019Updated 6 years ago
- Identifying peptide-receptor interactions using AlphaFold-Multimer☆27Sep 12, 2023Updated 2 years ago
- Code for peptide ligand design with machine learning models.☆31Dec 8, 2024Updated last year
- PROTACable is an end-to-end in-silico design toolkit for novel PROTACs☆29Jun 3, 2024Updated last year
- Protein design and variant prediction using autoregressive generative models☆120Jan 23, 2024Updated 2 years ago
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆29Dec 21, 2023Updated 2 years ago