Implementation of CycPeptMP, an accurate and efficient model for predicting the membrane permeability of cyclic peptides
☆29May 10, 2025Updated 11 months ago
Alternatives and similar repositories for cycpeptmp
Users that are interested in cycpeptmp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Making Protein folding accessible to all!☆26Mar 22, 2026Updated 3 weeks ago
- Introduction to cyclic peptide simulations and our group's protocols.☆16Sep 21, 2023Updated 2 years ago
- Cyclic-peptide - protein complexes benchmark and associated scripts and data☆15Aug 31, 2024Updated last year
- Tool to design cyclic peptides that mimic proteins and target their binding partners.☆17Jul 9, 2024Updated last year
- ☆74Jan 23, 2026Updated 2 months ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆37Aug 28, 2023Updated 2 years ago
- Multi_CycGT: A DL-Based Multimodal Model for Membrane Permeability Prediction of Cyclic Peptides☆20Dec 24, 2024Updated last year
- This script makes a cyclic peptide or cyclic nucleotide topology file for GROMACS out of (specially prepared) linear molecule topology fi…☆15Nov 24, 2020Updated 5 years ago
- List of papers about Peptide research using Deep Learning☆39Feb 27, 2026Updated last month
- ☆42Apr 30, 2024Updated last year
- ☆30Mar 21, 2025Updated last year
- Official repository for DiffPepBuilder and DiffPepDock tools☆124Oct 24, 2025Updated 5 months ago
- In silico directed evolution of peptide binders with AlphaFold☆265Jan 5, 2026Updated 3 months ago
- ☆16Dec 14, 2023Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆14Nov 20, 2024Updated last year
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆28Jul 7, 2023Updated 2 years ago
- ☆40Mar 7, 2026Updated last month
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- Collection of tools to calculate properties of natural or synthetic peptides and proteins.☆61Feb 25, 2026Updated last month
- Official implementation of SketchMol.☆33Feb 14, 2025Updated last year
- Transformer Based Language Model for Peptide Property Prediction☆51Aug 2, 2024Updated last year
- CREMP: Conformer-Rotamer Ensembles of Macrocyclic Peptides for Machine Learning☆21Aug 13, 2024Updated last year
- ☆23Mar 30, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆54Mar 23, 2026Updated 3 weeks ago
- Full-Atom Peptide Design based on Multi-modal Flow Matching (ICML 2024)☆103May 25, 2025Updated 10 months ago
- ☆37Jan 26, 2026Updated 2 months ago
- ☆19Jan 17, 2025Updated last year
- ☆12Oct 9, 2024Updated last year
- EvolveX, a de novo antibody computational design pipeline.☆23Sep 18, 2025Updated 7 months ago
- A deep learning model to predict anticancer peptides.☆24Jul 10, 2019Updated 6 years ago
- Structured Denoising Diffusion Models in Discrete State-Spaces☆15Dec 10, 2022Updated 3 years ago
- ☆27Aug 8, 2025Updated 8 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Rapid construction of chemical pipelines in interactive notebooks and cli usage☆13Sep 27, 2024Updated last year
- PSICHIC (pronounced Psychic) - PhySIcoCHemICal graph neural network for learning protein-ligand interaction fingerprints from sequence da…☆130Apr 9, 2026Updated last week
- Various tutorials about MD setup and analysis, protein-ligand docking, machine learning and lots of other interesting things.☆35Jan 2, 2021Updated 5 years ago
- SmartCADD is an open-source virtual screening platform that combines deep learning, computer-aided drug design (CADD), and quantum mecha…☆30Jan 16, 2025Updated last year
- HELM-GPT: de novo macrocyclic peptide design using generative pre-trained transformer☆33Jul 4, 2024Updated last year
- PROTACable is an end-to-end in-silico design toolkit for novel PROTACs☆29Jun 3, 2024Updated last year
- ☆20Jan 29, 2024Updated 2 years ago