kalininalab / alphafold_non_docker

Related projects ⓘ

Alternatives and complementary repositories for alphafold_non_docker

• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆595Updated last week
• KosinskiLab / AlphaPulldown
  ☆215Updated this week
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆268Updated this week
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆332Updated 5 months ago
• Zuricho / ParallelFold
  Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…
  ☆145Updated 8 months ago
• nrbennet / dl_binder_design
  ☆239Updated 3 months ago
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆485Updated 2 months ago
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆814Updated this week
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆327Updated last year
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆314Updated 4 months ago
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆615Updated last week
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆243Updated last year
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆186Updated 5 months ago
• soedinglab / hh-suite
  Remote protein homology detection suite.
  ☆539Updated this week
• Pymol-Scripts / Pymol-script-repo
  Collected scripts for Pymol
  ☆447Updated last month
• SysBioChalmers / DLKcat
  Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic mo…
  ☆130Updated last year
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆263Updated last week
• mheinzinger / ProstT5
  Bilingual Language Model for Protein Sequence and Structure
  ☆182Updated 3 weeks ago
• debbiemarkslab / EVcouplings
  Evolutionary couplings from protein and RNA sequence alignments
  ☆238Updated this week
• tttianhao / CLEAN
  CLEAN: a contrastive learning model for high-quality functional prediction of proteins
  ☆224Updated 3 months ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆175Updated last year
• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆150Updated 2 months ago
• kuixu / alphafold
  Install alphafold on the local machine, get out of docker.
  ☆99Updated 2 years ago
• pharmai / plip
  Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme …
  ☆459Updated 2 months ago
• biolists / folding_tools
  A collection of *fold* tools
  ☆288Updated last month
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆240Updated 8 months ago
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆146Updated last year
• baker-laboratory / RoseTTAFold-All-Atom
  ☆642Updated 3 months ago
• pablo-arantes / making-it-rain
  Cloud-based molecular simulations for everyone
  ☆392Updated last week
• PDB-REDO / dssp
  Application to assign secondary structure to proteins
  ☆166Updated 3 weeks ago