Alternatives and similar repositories for alphafold_non_docker

Users that are interested in alphafold_non_docker are comparing it to the libraries listed below

• KosinskiLab / AlphaPulldown
  ☆299Updated 2 weeks ago
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆787Updated 5 months ago
• Zuricho / ParallelFold
  Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…
  ☆172Updated last year
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆1,117Updated 2 weeks ago
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆929Updated 3 months ago
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆391Updated 2 years ago
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆633Updated last year
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆369Updated last year
• mheinzinger / ProstT5
  Bilingual Language Model for Protein Sequence and Structure
  ☆280Updated 11 months ago
• soedinglab / hh-suite
  Remote protein homology detection suite.
  ☆602Updated 3 months ago
• nrbennet / dl_binder_design
  ☆370Updated last year
• debbiemarkslab / EVcouplings
  Evolutionary couplings from protein and RNA sequence alignments
  ☆291Updated last month
• tttianhao / CLEAN
  CLEAN: a contrastive learning model for high-quality functional prediction of proteins
  ☆295Updated 8 months ago
• mat10d / EvolvePro
  This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…
  ☆316Updated 5 months ago
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆250Updated last year
• biolists / folding_tools
  A collection of *fold* tools
  ☆300Updated 4 months ago
• Pymol-Scripts / Pymol-script-repo
  Collected scripts for Pymol
  ☆502Updated 4 months ago
• PDB-REDO / dssp
  Application to assign secondary structure to proteins
  ☆228Updated 2 weeks ago
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆848Updated last month
• RosettaCommons / rosetta
  The Rosetta Bio-macromolecule modeling package.
  ☆353Updated this week
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆323Updated last year
• RosettaCommons / RFantibody
  ☆392Updated last month
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆274Updated 2 years ago
• SysBioChalmers / DLKcat
  Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic mo…
  ☆174Updated 2 years ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆217Updated 2 years ago
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆366Updated 2 months ago
• baker-laboratory / RoseTTAFold-All-Atom
  ☆773Updated 6 months ago
• kuixu / alphafold
  Install alphafold on the local machine, get out of docker.
  ☆103Updated 4 years ago
• wallnerlab / DockQ
  DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models
  ☆345Updated last month
• ccsb-scripps / AutoDock-GPU
  AutoDock for GPUs and other accelerators
  ☆539Updated 2 months ago