Alternatives and similar repositories for DockQ

Users that are interested in DockQ are comparing it to the libraries listed below

• zrqiao / NeuralPLexer
  NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model
  ☆291Updated last year
• Kuhlman-Lab / ThermoMPNN
  GNN trained to predict changes in thermodynamic stability for protein point mutants
  ☆174Updated 4 months ago
• patrickbryant1 / Umol
  Protein-ligand structure prediction
  ☆217Updated 10 months ago
• RosettaCommons / RFDesign
  Protein hallucination and inpainting with RoseTTAFold
  ☆260Updated 2 years ago
• RosettaCommons / RFantibody
  ☆224Updated 2 months ago
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆311Updated 7 months ago
• dauparas / LigandMPNN
  ☆390Updated 4 months ago
• rdk / p2rank
  P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
  ☆329Updated this week
• nrbennet / dl_binder_design
  ☆321Updated 10 months ago
• oxpig / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆141Updated 4 months ago
• rifdock / rifdock
  Rifdock Library for Conformational Search
  ☆160Updated last year
• luwei0917 / DynamicBind
  repo for DynamicBind: Predicting ligand-specific protein-ligand complex structure with a deep equivariant generative model
  ☆252Updated last year
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆167Updated this week
• patrickbryant1 / EvoBind
  In silico directed evolution of peptide binders with AlphaFold
  ☆199Updated last week
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆158Updated 3 months ago
• uw-ipd / RoseTTAFold2
  ☆194Updated 2 months ago
• plinder-org / plinder
  Protein Ligand INteraction Dataset and Evaluation Resource
  ☆229Updated 2 weeks ago
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆403Updated 11 months ago
• ikalvet / heme_binder_diffusion
  ☆130Updated 8 months ago
• guyujun / pyrosetta-basic
  ☆167Updated 3 years ago
• Merck / BioPhi
  BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…
  ☆195Updated last month
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆205Updated last year
• ProteinDesignLab / protpardelle
  Diffusion-based all-atom protein generative model.
  ☆199Updated 4 months ago
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆159Updated 2 years ago
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆216Updated last year
• LPDI-EPFL / masif_seed
  Masif seed paper repository
  ☆154Updated 2 years ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆113Updated last year
• jertubiana / ScanNet
  ☆126Updated this week
• Kortemme-Lab / flex_ddG_tutorial
  ☆117Updated 2 years ago
• hefeda / design_tools
  A compilation of deep learning methods for protein design
  ☆97Updated 2 years ago