Alternatives and similar repositories for OFF-PEAK

Users that are interested in OFF-PEAK are comparing it to the libraries listed below

• niu-lab / msisensor-ct
  Microsatellite instability (MSI) detection for cfDNA samples.
  ☆19Updated 4 years ago
• gimelbrantlab / Qllelic
  Enabling differential allele-specific analysis
  ☆11Updated 8 months ago
• dantaki / CNVplot
  Plot CNV data with a genome viewer in R
  ☆15Updated 8 years ago
• ShenLab-Genomics / MAGPIE
  ☆14Updated 10 months ago
• gimelbrantlab / ASEReadCounter_star
  Preprocessing sequencing data for allele-specific analysis
  ☆12Updated 5 months ago
• babelomics / SMAca
  SMN1 copy-number and sequence variant analysis from next generation sequencing data
  ☆23Updated 2 years ago
• dellytools / svprops
  Computes various SV statistics
  ☆14Updated last year
• rdemolgen / SavvySuite
  Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes
  ☆31Updated 3 weeks ago
• KhiabanianLab / All-FIT
  All-FIT - Allele-Frequency-based Imputation of Tumor Purity
  ☆18Updated 5 years ago
• liusihan / seGMM
  A new tool to infer sex from massively parallel sequencing data.
  ☆17Updated 3 months ago
• cortes-ciriano-lab / ReConPlot
  ☆23Updated 8 months ago
• talkowski-lab / svtk
  ☆35Updated 4 years ago
• ZuchnerLab / Maverick
  A Mendelian approach to variant effect prediction built in keras
  ☆19Updated 10 months ago
• a-xavier / tapes
  TAPES : a Tool for Assessment and Prioritisation in Exome Studies
  ☆24Updated 2 months ago
• nf-cmgg / smallvariants
  A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data
  ☆13Updated last week
• dellytools / sansa
  Structural variant VCF annotation, duplicate removal and comparison
  ☆33Updated 6 months ago
• findingdan / UPDio
  ☆14Updated last year
• czc / nb_distribution
  novoBreak: local assembly for breakpoint detection in cancer genomes
  ☆26Updated 7 years ago
• sdchandra / CNAclinic
  ☆25Updated last year
• molgenis / CoNVaDING
  Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV…
  ☆21Updated 5 years ago
• fredsanto / coverageMaster
  ☆12Updated last year
• Illumina / Gauchian
  A variant caller for the GBA gene using WGS data
  ☆22Updated last year
• ArkingLab / MitoHPC
  ☆23Updated last year
• HurlesGroupSanger / indelible
  Structural Variation breakpoint discovery via adaptive learning
  ☆16Updated 2 years ago
• SD-Genomics / DeviCNV
  Detection and Visualization of Exon-Level Copy Number Variants in Targeted Next Generation Sequencing Data
  ☆17Updated 3 years ago
• talkowski-lab / rCNV2
  Aggregation and analyses of rare CNVs across diseases
  ☆14Updated 2 years ago
• MarWoes / wg-blimp
  wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data
  ☆28Updated 3 years ago
• UMCUGenetics / COLO829_somaticSV
  Scripts and files used in the generation of the COLO829 somatic SV truthset.
  ☆13Updated 3 years ago
• heinc1010 / BAMixChecker
  BAMixChecker: A fast and efficient tool for sample matching checkup
  ☆15Updated 3 years ago
• VUmcCGP / sanefalcon
  SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…
  ☆14Updated 5 years ago