mquinodo / OFF-PEAKLinks
CNV detection tool for WES data
☆11Updated last year
Alternatives and similar repositories for OFF-PEAK
Users that are interested in OFF-PEAK are comparing it to the libraries listed below
Sorting:
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Updated 2 years ago
- Microsatellite instability (MSI) detection for cfDNA samples.☆19Updated 4 years ago
- Enabling differential allele-specific analysis☆11Updated 10 months ago
- Plot CNV data with a genome viewer in R☆15Updated 8 years ago
- A Mendelian approach to variant effect prediction built in keras☆19Updated last year
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated 2 months ago
- CADD-SV – a framework to score the effect of structural variants☆16Updated last week
- ☆14Updated last year
- Computes various SV statistics☆14Updated 2 years ago
- This repo is be archived, these workflows are still housed housed in the GATK repository under the scripts directory. The workflows are a…☆22Updated 5 years ago
- CNV Rapid Aberration Detection And Reporting☆12Updated 4 years ago
- BAMixChecker: A fast and efficient tool for sample matching checkup☆15Updated 3 years ago
- Tools to process LIANTI sequence data☆23Updated 6 years ago
- Preprocessing sequencing data for allele-specific analysis☆12Updated 7 months ago
- ☆14Updated last year
- Fast and scalable variant annotation tool☆30Updated 3 years ago
- A variant caller for the GBA gene using WGS data☆23Updated last year
- ☆35Updated 4 years ago
- TAPES : a Tool for Assessment and Prioritisation in Exome Studies☆25Updated last month
- This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially …☆27Updated 3 months ago
- A simple script to create a customizable html file from an AnnotSV output.☆19Updated last year
- ☆12Updated last year
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆19Updated last year
- ☆26Updated last year
- CN-Learn☆30Updated 5 years ago
- A new tool to infer sex from massively parallel sequencing data.☆17Updated 5 months ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Updated 6 years ago
- heuristics to merge structural variant calls in VCF format.☆38Updated 9 years ago
- VCF files of SVs using long-read sequencing (LRS).☆22Updated 3 years ago