☆13Jul 17, 2024Updated last year
Alternatives and similar repositories for coverageMaster
Users that are interested in coverageMaster are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A webtool for the clinical interpretation of CNVs in rare disease patients☆13Jun 10, 2022Updated 3 years ago
- ☆19Mar 14, 2022Updated 4 years ago
- SMN1 copy-number and sequence variant analysis from next generation sequencing data☆23Feb 20, 2026Updated last month
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆19Dec 6, 2023Updated 2 years ago
- Interpretable prioritization of splice variants in diagnostic next-generation sequencing☆18May 9, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Classifier of pathogenic non-coding variants in Mendelian diseases☆11Feb 6, 2020Updated 6 years ago
- Basic UPD caller☆12Aug 23, 2021Updated 4 years ago
- Determining tandem repeat lengths using raw nanopore signals.☆15Sep 11, 2023Updated 2 years ago
- Benchmarking of CNV calling tools☆18May 18, 2019Updated 6 years ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆75Sep 4, 2024Updated last year
- Automatised pipeline of ConsensuSV workflow.☆24Aug 23, 2023Updated 2 years ago
- CN-Learn☆30Jan 24, 2020Updated 6 years ago
- dv-trio provides a pipeline to call variants for a trio (father-mother-child) using DeepVariants [1]. Genomic Variant Calling Files (gVCF…☆11Feb 3, 2021Updated 5 years ago
- Structural variant pipeline☆18Jun 25, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Evaluation of phasing performance☆23Mar 6, 2018Updated 8 years ago
- Official code repository for JAX-CNV☆14Jan 16, 2020Updated 6 years ago
- ExomeDepth R package for the detection of copy number variants in exomes and gene panels using high throughput DNA sequencing data.☆78Jun 30, 2025Updated 9 months ago
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated last month
- A Mendelian approach to variant effect prediction built in keras☆20Nov 3, 2025Updated 5 months ago
- Gene copy number prediction from k-mer frequencies☆16Jul 29, 2024Updated last year
- HadoopCNV is a MapReduce-based copy number variation caller for genome sequencing data☆20Apr 25, 2017Updated 8 years ago
- Scalable genomic analysis pipelines, written in WDL☆12Mar 11, 2026Updated 3 weeks ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆49Jun 2, 2020Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- These scripts reformat a VCF into a SQLite database, with R☆15Jul 15, 2021Updated 4 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 4 months ago
- GenoTypes Compressor☆16May 19, 2022Updated 3 years ago
- CNV detection tool for WES data☆12Aug 21, 2024Updated last year
- ☆29Sep 11, 2025Updated 6 months ago
- An insertion caller for Illumina paired-end WGS data.☆24Aug 22, 2025Updated 7 months ago
- Accompanying analysis code for the FRASER manuscript☆25Aug 27, 2020Updated 5 years ago
- A deep learning approach to de novo variant calling in next generation sequencing data☆21Mar 2, 2026Updated last month
- Python client library for Guppy☆32Aug 15, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- for visual evaluation of read support for structural variation☆56Jun 4, 2024Updated last year
- a tool for predicting mitochondrial DNA deletions using soft-clipping☆23Feb 3, 2022Updated 4 years ago
- Compressor for Nanopore Sequencing Reads☆23Feb 10, 2023Updated 3 years ago
- Accucopy is a computational method that infers Allele-Specific Copy Number alterations from low-coverage low-purity tumor sequencing data…☆17Mar 6, 2024Updated 2 years ago
- Call regions of homozygosity and make tentative UPD calls☆12Jun 27, 2025Updated 9 months ago
- Example project for integrating igv.js and flask☆26May 17, 2025Updated 10 months ago
- Correcting errors in noisy long reads using variation graphs☆51Nov 17, 2022Updated 3 years ago