Alternatives and similar repositories for ChromoGen

Users that are interested in ChromoGen are comparing it to the libraries listed below

• ml-jku / DNA-xLSTM
  ☆14Updated 7 months ago
• mims-harvard / COMPASS
  Generalizable AI predicts immunotherapy outcomes across cancers and treatments
  ☆36Updated last month
• biagent-dev / bia
  BioInformatics Agent (BIA): Unleashing the Power of Large Language Models to Reshape Bioinformatics Workflow
  ☆36Updated 10 months ago
• ArcInstitute / state
  State is a machine learning model that predicts cellular perturbation response across diverse contexts
  ☆97Updated this week
• haiyuan-yu-lab / PIONEER
  ☆26Updated 6 months ago
• Genentech / polygraph
  Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of …
  ☆32Updated 3 months ago
• mims-harvard / SPECTRA
  SPECTRA: Spectral framework for evaluation of biomedical AI models
  ☆39Updated 3 months ago
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆38Updated 9 months ago
• lakigigar / bioRxiv-diff
  ☆12Updated 9 months ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆30Updated last year
• eternagame / EternaFold
  Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
  ☆62Updated 11 months ago
• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆60Updated 2 months ago
• Pharmaco-OmicsLab / EasyPubPlot
  Shiny app to easily create publishable plots for scientific papers
  ☆34Updated 3 months ago
• GfellerLab / MixMHCpred
  HLA-I ligand predictor
  ☆40Updated 6 months ago
• FunctionLab / tapioca
  a framework for predicting global protein-protein interaction networks from dynamic mass spec data
  ☆24Updated last year
• zou-group / CellVoyager
  ☆51Updated this week
• wells-wood-research / chronowska-stam-wood-2024-protein-design-archive
  Code supporting the Protein Design Archive (PDA) database publication
  ☆16Updated 3 weeks ago
• Genentech / iterative-perturb-seq
  Sequential Optimal Experimental Design of Perturbation Screens Guided by Multimodal Priors
  ☆40Updated last year
• ctokheim / deepDegron
  Deep learning model to predict degron sequences
  ☆20Updated 2 years ago
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated last year
• bowang-lab / Orthrus
  Orthrus is a mature RNA model for RNA property prediction. It uses a mamba encoder backbone, a variant of state-space models specifical…
  ☆66Updated 5 months ago
• open2c / polychrom
  Chromosome polymer simulations and in silico capture experiments
  ☆50Updated 2 months ago
• Genentech / SpatialAgent
  ☆114Updated 2 months ago
• crazyhottommy / Machine_learning_drug_discovery
  ☆27Updated 2 months ago
• Illumina / PromoterAI
  ☆54Updated this week
• hsulab-arc / BridgeRNA2024
  ☆11Updated 10 months ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆82Updated this week
• pgmikhael / protgps
  ☆87Updated last week
• FPPGroup / CodonBERT
  CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.
  ☆38Updated 9 months ago
• snap-stanford / BioDiscoveryAgent
  BioDiscoveryAgent is an LLM-based AI agent for closed-loop design of genetic perturbation experiments
  ☆73Updated last month