Witiy / GOTLinks
☆16Updated 5 months ago
Alternatives and similar repositories for GOT
Users that are interested in GOT are comparing it to the libraries listed below
Sorting:
- Single-cell epigenomics analysis tools☆308Updated last week
- This is the alpha version of the CellOracle package☆416Updated last week
- 单细胞分析的中文pipeline☆268Updated last year
- A tool for semi-automatic cell type classification☆451Updated last week
- ☆222Updated last year
- SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) a…☆245Updated 3 weeks ago
- CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.☆219Updated last month
- CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.☆464Updated 8 months ago
- Scanpy Tutorials.☆234Updated last week
- TCR and BCR assembly from RNA-seq data☆338Updated 2 weeks ago
- A modular framework for multimodal cross-cell-type transcriptional regulation models☆101Updated this week
- A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to repr…☆233Updated last month
- A toolkit of spatial transcriptomic analysis.☆273Updated 2 months ago
- Bias factorized, base-resolution deep learning models of chromatin accessibility (chromBPNet)☆207Updated last week
- A package to help convert different single-cell data formats to each other☆454Updated last year
- Papers with code for single cell related papers☆303Updated last month
- ☆337Updated 8 months ago
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆165Updated 11 months ago
- scripts and notebooks from sanbomics☆463Updated last year
- A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.☆834Updated last week
- ☆183Updated last year
- Benchmarking analysis of data integration tools☆406Updated 4 months ago
- rapids_singlecell: GPU-accelerated framework for scRNA analysis☆296Updated last week
- scATAC-seq data analysis tools and papers☆128Updated 7 months ago
- Single-cell perturbation analysis☆283Updated last week
- I redo the ScRNA analysis in the paper of Wang et al 2020, Nat Comm. Here's my modified script for Helen He Zhu github (https://github.co…☆12Updated 4 years ago
- LIANA+: an all-in-one framework for cell-cell communication☆265Updated 2 weeks ago
- ☆390Updated 2 months ago
- EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.☆230Updated last year
- Integrating GWAS and spatial transcriptomics for spatially resolved mapping of cells associated with human complex traits.☆194Updated last month