Alternatives and similar repositories for NanoBERTa-ASP:

Users that are interested in NanoBERTa-ASP are comparing it to the libraries listed below

• eva-smorodina / antibody_developability
  ☆9Updated last year
• Merck / AbLEF
  Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction
  ☆10Updated 8 months ago
• programmablebio / saltnpeppr
  An Interface-Predicting Language Model for Designing Peptide-Guided Protein Degraders
  ☆16Updated 4 months ago
• feiglab / idpgan
  ☆45Updated 2 weeks ago
• csi-greifflab / developability_profiling
  ☆16Updated last week
• jaaamessszzz / BindingSitesFromFragments
  De novo design of small molecule binding sites into proteins
  ☆13Updated 3 years ago
• swanss / FragFold
  ☆18Updated 2 weeks ago
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 3 weeks ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆29Updated 3 months ago
• oxpig / PLAbDab
  The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…
  ☆23Updated 6 months ago
• BIMSBbioinfo / CompassDock
  Official Implementation of CompassDock
  ☆17Updated 3 months ago
• ohuelab / MEGADOCK-on-Colab
  MEGADOCK on Google Colaboratory
  ☆14Updated last year
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆26Updated last year
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆23Updated 4 months ago
• Lailabcode / DeepSCM
  A convolutional neural network model to predict spatial charge map (SCM) score, a molecular dynamics simulation-based model to predict an…
  ☆21Updated 2 years ago
• Degiacomi-Lab / biobox
  a toolbox for the manipulation, modelling and analysis of molecular structures
  ☆24Updated 2 months ago
• psalveso / pyRIF
  Using Rotamer Interaction Fields from RIFGen/Dock in python
  ☆16Updated 3 years ago
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆16Updated last year
• CSB-KaracaLab / prot-on
  This repo contains the collection of codes to find designer interfacial mutations
  ☆16Updated last year
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆17Updated 6 months ago
• Sanofi-Public / LMR-SurfaceID
  Repo contains source code of the SurfaceID paper
  ☆15Updated 10 months ago
• dina-lab3D / NanoNet
  ☆44Updated last year
• daisybio / data-leakage-ppi-prediction
  Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'
  ☆20Updated last year
• Jnelen / DiffDockHPC
  DiffDock implementation that adds support for HPC execution using Slurm and Singularity
  ☆24Updated 3 months ago
• CarbonMatrixLab / immunefold
  Official open-source of Accurate structure prediction of immune proteins using parameter-efficient transfer learning
  ☆17Updated 2 weeks ago
• strauchlab / scaffold_design
  ☆16Updated 10 months ago
• pepamengual / UEP
  ☆9Updated last year
• johnyang101 / pmpnndiff
  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
  ☆15Updated 11 months ago
• smiles724 / PeptideDesign
  ☆16Updated this week
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 3 years ago